Strain Fitness in Variovorax sp. SCN45 around GFF6255

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
47,980	+		GFF6254	0.13	-1.4
47,981	-		GFF6254	0.13	+0.3
48,070	+		GFF6254	0.23	+2.1
48,070	+		GFF6254	0.23	-2.9
48,071	-		GFF6254	0.23	+0.8
49,075	+		GFF6255	0.21	-0.8
49,075	+		GFF6255	0.21	-2.0
49,327	+		GFF6255	0.43	-2.9
49,361	-		GFF6255	0.46	-0.8
49,407	-		GFF6255	0.50	+1.3
49,435	+		GFF6255	0.52	-3.6
49,436	-		GFF6255	0.52	-1.0
49,438	+		GFF6255	0.52	+1.2
49,438	+		GFF6255	0.52	+2.5
49,438	+		GFF6255	0.52	+1.7
49,438	+		GFF6255	0.52	+0.1
49,438	+		GFF6255	0.52	+0.5
49,438	+		GFF6255	0.52	-0.2
49,438	+		GFF6255	0.52	-0.2
49,439	-		GFF6255	0.52	+0.5
49,439	-		GFF6255	0.52	-0.5
49,439	-		GFF6255	0.52	+0.0
49,439	-		GFF6255	0.52	+0.9
49,439	-		GFF6255	0.52	-2.3
49,447	-		GFF6255	0.53	+0.6
49,462	+		GFF6255	0.54	+0.7
50,451	-		GFF6256	0.65	+1.4
50,451	-		GFF6256	0.65	+0.3
50,514	+		GFF6256	0.74	-1.0
50,515	-		GFF6256	0.74	+1.2
50,523	+		GFF6256	0.75	-1.1
50,523	+		GFF6256	0.75	+0.0
50,523	+		GFF6256	0.75	-0.7
50,625	-		GFF6256	0.90	+0.9
50,732	+				+0.7
50,732	+				-1.8
50,732	+				+0.1
50,733	-				-1.2