Strain Fitness in Variovorax sp. SCN45 around GFF6204

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
110,418	+		GFF6203	0.17	-0.9
110,418	+		GFF6203	0.17	+0.3
110,419	-		GFF6203	0.18	-2.1
110,419	-		GFF6203	0.18	+1.6
110,568	+		GFF6203	0.33	-0.6
110,568	+		GFF6203	0.33	-0.5
110,568	+		GFF6203	0.33	-3.2
110,569	-		GFF6203	0.33	+1.2
110,686	-		GFF6203	0.45	-0.7
110,818	-		GFF6203	0.58	+0.6
111,270	+				-0.2
111,270	+				+0.5
111,275	+				-0.9
111,275	+				-1.8
111,276	-				+0.4
111,705	+		GFF6204	0.23	-1.6
111,705	+		GFF6204	0.23	-0.2
111,744	+		GFF6204	0.25	-2.3
111,851	+		GFF6204	0.31	+1.3
111,852	-		GFF6204	0.31	+0.5
111,906	+		GFF6204	0.34	-0.4
111,906	+		GFF6204	0.34	+0.1
111,907	-		GFF6204	0.34	-0.2
112,069	-		GFF6204	0.44	-0.5
112,365	+		GFF6204	0.60	+1.1
112,365	+		GFF6204	0.60	+0.1
112,366	-		GFF6204	0.60	+2.0
112,366	-		GFF6204	0.60	-0.2
113,360	-		GFF6205	0.29	-2.0
113,840	-				-2.8
113,955	+		GFF6206	0.25	-2.9