Strain Fitness in Variovorax sp. SCN45 around GFF5738

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
112,219	-		GFF5737	0.34	-2.3
112,219	-		GFF5737	0.34	-1.7
113,403	+		GFF5738	0.55	-0.6
113,442	+		GFF5738	0.60	-1.8
113,443	-		GFF5738	0.60	-0.5
113,798	+		GFF5739	0.16	+1.0
113,799	-		GFF5739	0.16	-0.9
114,038	-				+0.9
114,041	+				+1.1
114,041	+				-1.6
114,041	+				-0.5
114,042	-				-0.7
114,043	+				+1.5
114,043	+				+1.8
114,043	+				+0.7
114,043	+				-0.3
114,043	+				-1.3
114,043	+				+1.2
114,044	-				-0.9
114,044	-				+0.1
114,044	-				+2.3
114,044	-				-0.1
114,044	-				-0.1
114,437	-		GFF5740	0.53	-1.0
114,448	+		GFF5740	0.54	+3.3