Strain Fitness in Variovorax sp. SCN45 around GFF5724

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
92,604	-		GFF5723	0.26	+0.1
92,858	+		GFF5723	0.51	+2.3
92,858	+		GFF5723	0.51	-2.1
92,859	-		GFF5723	0.51	+0.2
92,859	-		GFF5723	0.51	-2.1
92,864	+		GFF5723	0.51	+1.1
93,131	+		GFF5723	0.78	-1.4
93,132	-		GFF5723	0.78	-0.7
93,132	-		GFF5723	0.78	+0.0
93,177	-		GFF5723	0.82	-0.4
93,185	+		GFF5723	0.83	-0.1
93,186	-		GFF5723	0.83	+1.4
93,300	-				-1.3
93,317	+				-0.6
93,980	-				-0.3
94,031	+				-0.2
94,258	-		GFF5725	0.15	-2.7
94,581	+		GFF5725	0.36	-1.0