Strain Fitness in Variovorax sp. SCN45 around GFF2653

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
71,329	+		GFF2652	0.32	-0.5
71,329	+		GFF2652	0.32	-0.0
71,461	+		GFF2652	0.43	-0.1
71,461	+		GFF2652	0.43	-0.5
71,462	-		GFF2652	0.43	+1.3
71,462	-		GFF2652	0.43	+0.9
71,462	-		GFF2652	0.43	-1.3
71,462	-		GFF2652	0.43	-0.1
71,462	-		GFF2652	0.43	-2.9
71,497	+		GFF2652	0.46	-0.1
71,497	+		GFF2652	0.46	+0.8
71,497	+		GFF2652	0.46	-0.5
71,636	-		GFF2652	0.58	+1.3
71,845	+		GFF2652	0.76	-0.7
71,846	-		GFF2652	0.76	+1.5
71,869	+		GFF2652	0.78	+1.0
71,870	-		GFF2652	0.78	-0.8
72,094	+				-0.8
72,094	+				-2.0
72,095	-				+0.3
72,270	+				+0.3
72,270	+				-0.5
72,270	+				-2.9
72,271	-				+0.6
72,636	+		GFF2653	0.32	-0.7
72,636	+		GFF2653	0.32	-0.5
72,637	-		GFF2653	0.32	-0.2
72,637	-		GFF2653	0.32	+0.3
72,637	-		GFF2653	0.32	+1.0
72,754	-		GFF2653	0.40	-0.3
72,754	-		GFF2653	0.40	+0.7
72,876	+		GFF2653	0.47	+0.2
72,876	+		GFF2653	0.47	+0.8
72,876	+		GFF2653	0.47	-0.8
73,111	-		GFF2653	0.62	-2.4
73,152	+		GFF2653	0.64	-1.2
73,152	+		GFF2653	0.64	+1.6
73,152	+		GFF2653	0.64	-0.5
73,153	-		GFF2653	0.64	-1.4
73,153	-		GFF2653	0.64	+0.6
73,457	-		GFF2653	0.83	+0.6
73,477	-		GFF2653	0.84	-1.1
73,479	+		GFF2653	0.84	+1.0
73,480	-		GFF2653	0.85	+0.0
73,608	+				+0.7
73,609	-				+0.0
73,674	+				-0.3
73,675	-				+0.9
73,675	-				-1.4
73,745	+				-1.1
73,745	+				+0.8
73,746	-				+0.0
73,746	-				+0.2
73,746	-				-0.3
74,583	+		GFF2654	0.47	-3.4