Strain Fitness in Variovorax sp. SCN45 around GFF231

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
258,447	+				+0.6
258,447	+				-2.0
258,447	+				+1.8
258,474	+				+0.1
258,474	+				-3.4
258,475	-				-1.4
258,498	+				-2.9
258,498	+				+2.8
258,498	+				-0.8
258,498	+				-0.6
258,498	+				-1.3
258,499	-				-0.4
258,499	-				-0.8
258,499	-				-0.2
258,499	-				-0.2
258,501	-				-0.8
258,641	-				+0.8
258,641	-				+1.8
258,664	-				-0.2
259,036	-		GFF230	0.56	+0.8
259,335	+				+1.8
259,381	-				-2.3
259,427	+				-0.0
259,431	+				-0.5
259,431	+				-0.8
259,431	+				-2.5
259,431	+				-0.2
259,431	+				-2.1
259,431	+				+0.1
259,431	+				+1.7
259,432	-				+0.8
259,432	-				-1.9
259,432	-				-0.2
259,432	-				-0.2
259,438	+				-2.1
259,438	+				-0.5
259,438	+				+0.1
259,438	+				-0.2
259,439	-				+1.2
259,439	-				-0.2
259,439	-				-0.4
259,439	-				+0.2
259,547	+		GFF231	0.12	+0.8
259,548	-		GFF231	0.12	+1.3
259,548	-		GFF231	0.12	+1.2
259,592	+		GFF231	0.17	+0.4
259,593	-		GFF231	0.18	-2.2
259,593	-		GFF231	0.18	+0.5
259,611	-		GFF231	0.20	-0.7
259,611	-		GFF231	0.20	-0.1
259,611	-		GFF231	0.20	-0.8
259,611	-		GFF231	0.20	-1.5
260,216	+				-0.7
260,216	+				-0.9
260,216	+				-0.5
260,217	-				-1.6
260,217	-				-1.2
260,334	+				+1.3
260,334	+				-0.2
260,334	+				-0.1
260,334	+				-0.3
260,334	+				-3.2
260,334	+				-0.4
260,334	+				-0.2
260,335	-				+0.3
260,335	-				-1.7
260,335	-				-1.0
260,364	+				+1.8
260,364	+				-0.5
260,365	-				+0.2
260,365	-				+0.2
260,365	-				+0.8
260,365	-				-0.5
260,365	-				+0.8
260,365	-				+0.2
260,367	+				+1.8
260,368	-				-0.2
260,368	-				-0.2
260,369	-				+1.8
260,466	+				+1.8
260,652	+		GFF232	0.14	+1.8
260,652	+		GFF232	0.14	+0.2
260,652	+		GFF232	0.14	+0.2
260,652	+		GFF232	0.14	+0.8
260,652	+		GFF232	0.14	+0.2
260,653	-		GFF232	0.14	-0.5
260,653	-		GFF232	0.14	+1.8
260,691	+		GFF232	0.16	+0.8
260,691	+		GFF232	0.16	+0.8
260,691	+		GFF232	0.16	-0.2
260,691	+		GFF232	0.16	+1.8
260,691	+		GFF232	0.16	+0.8
260,692	-		GFF232	0.16	-0.2
260,692	-		GFF232	0.16	+1.8
260,692	-		GFF232	0.16	-0.2
260,739	+		GFF232	0.18	+1.8
260,799	+		GFF232	0.20	+0.2
260,800	-		GFF232	0.20	+1.8
260,887	-		GFF232	0.24	+1.8
260,887	-		GFF232	0.24	+1.8