Strain Fitness in Variovorax sp. SCN45 around GFF1190

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
506,118	-		GFF1188	0.48	-2.4
506,118	-		GFF1188	0.48	-0.5
506,118	-		GFF1188	0.48	-1.2
506,118	-		GFF1188	0.48	-1.2
506,196	-		GFF1188	0.58	-2.6
506,196	-		GFF1188	0.58	-0.2
506,196	-		GFF1188	0.58	-1.6
506,628	-		GFF1189	0.33	-1.8
506,998	+		GFF1190	0.22	-0.1
506,999	-		GFF1190	0.22	-1.0
506,999	-		GFF1190	0.22	-2.4
506,999	-		GFF1190	0.22	+0.3
506,999	-		GFF1190	0.22	-3.3
507,109	+		GFF1190	0.32	-0.7
507,109	+		GFF1190	0.32	-1.8
507,110	-		GFF1190	0.32	+0.1
508,007	+				-0.5
508,008	-				-3.0
508,098	-				-3.7
508,290	-				-1.3
508,715	+				-0.2
508,715	+				-1.6
508,715	+				-1.8
508,716	-				-2.2
508,716	-				-0.2
508,716	-				-0.5
508,716	-				-1.9
508,716	-				-1.9
508,716	-				-1.2
508,716	-				-0.2
508,716	-				-1.2
508,716	-				-0.2