Strain Fitness in Variovorax sp. SCN45 around GFF791

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
83,136	+				+0.5
83,136	+				-0.3
83,136	+				+1.7
83,136	+				-1.8
83,136	+				-2.5
83,136	+				-0.2
83,136	+				-0.3
83,136	+				-1.0
83,137	-				+1.0
83,137	-				+0.9
83,137	-				+0.7
83,137	-				-2.6
83,137	-				-2.6
83,137	-				-0.9
83,137	-				-3.6
83,137	-				-1.2
83,174	-				+1.8
83,365	+		GFF790	0.17	-0.3
83,365	+		GFF790	0.17	-3.7
83,503	+		GFF790	0.38	-1.2
83,503	+		GFF790	0.38	+0.3
83,503	+		GFF790	0.38	+2.4
83,504	-		GFF790	0.38	+0.1
83,504	-		GFF790	0.38	-1.3
83,632	+		GFF790	0.57	-0.2
83,633	-		GFF790	0.57	+1.2
83,633	-		GFF790	0.57	-0.7
83,726	+		GFF790	0.71	-1.3
83,726	+		GFF790	0.71	-0.1
83,727	-		GFF790	0.71	+0.3
83,727	-		GFF790	0.71	-0.8
83,727	-		GFF790	0.71	-0.2
83,978	+				-1.2
83,979	-				-0.7
84,107	+		GFF791	0.33	+1.7
84,107	+		GFF791	0.33	+0.4
84,107	+		GFF791	0.33	-0.5
84,107	+		GFF791	0.33	+0.0
84,107	+		GFF791	0.33	-0.8
84,108	-		GFF791	0.33	+3.0
84,108	-		GFF791	0.33	-0.8
84,108	-		GFF791	0.33	-0.0
84,137	+		GFF791	0.39	-0.6
84,137	+		GFF791	0.39	+0.9
84,138	-		GFF791	0.39	+0.5
84,465	-				-0.0
84,496	+				-0.8
84,496	+				+2.0
84,496	+				+1.1
84,496	+				-2.7
84,497	-				-1.7
84,497	-				-0.7
84,497	-				-0.8
84,497	-				+0.5
84,497	-				-0.5
84,497	-				-1.8
84,502	+				-2.0
84,502	+				-0.4
84,502	+				-2.7
84,502	+				+0.4
84,503	-				+0.5
84,503	-				-2.9
84,503	-				-0.3
84,503	-				-0.0
84,846	-		GFF792	0.35	-1.9
84,846	-		GFF792	0.35	+0.1
85,039	+		GFF792	0.54	-0.8
85,040	-		GFF792	0.54	+0.2
85,040	-		GFF792	0.54	+0.8
85,040	-		GFF792	0.54	-1.2
85,040	-		GFF792	0.54	-0.6
85,220	+		GFF792	0.72	-2.9
85,220	+		GFF792	0.72	+0.9
85,221	-		GFF792	0.72	-0.0
85,221	-		GFF792	0.72	+0.8
85,221	-		GFF792	0.72	-1.1
85,454	+				-0.3
85,454	+				-0.4
85,454	+				-0.0
85,454	+				+1.4
85,454	+				-0.6
85,455	-				-3.0
85,455	-				-1.6
85,455	-				-1.5