Strain Fitness in Variovorax sp. SCN45 around GFF745

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
7,512	+				-0.2
7,512	+				+0.7
7,512	+				+0.8
7,512	+				+0.6
7,512	+				+0.8
7,513	-				+2.6
7,513	-				-0.2
7,513	-				+1.6
7,513	-				-2.3
7,513	-				-0.3
7,513	-				-1.8
7,513	-				-1.7
7,704	+		GFF744	0.25	-1.8
7,705	-		GFF744	0.25	-0.6
7,797	+		GFF744	0.35	-0.3
7,797	+		GFF744	0.35	-0.4
7,797	+		GFF744	0.35	-1.7
7,797	+		GFF744	0.35	-3.0
7,798	-		GFF744	0.35	+1.3
7,798	-		GFF744	0.35	-0.0
7,798	-		GFF744	0.35	-1.2
8,010	+		GFF744	0.59	-2.2
8,010	+		GFF744	0.59	-0.6
8,010	+		GFF744	0.59	+1.7
8,010	+		GFF744	0.59	-1.0
8,010	+		GFF744	0.59	-0.0
8,010	+		GFF744	0.59	-1.1
8,010	+		GFF744	0.59	-1.8
8,010	+		GFF744	0.59	-3.7
8,010	+		GFF744	0.59	-1.1
8,010	+		GFF744	0.59	+1.4
8,010	+		GFF744	0.59	-0.3
8,011	-		GFF744	0.59	-0.3
8,011	-		GFF744	0.59	-2.2
8,011	-		GFF744	0.59	-0.3
8,011	-		GFF744	0.59	+0.6
8,011	-		GFF744	0.59	-1.4
8,011	-		GFF744	0.59	-1.8
8,011	-		GFF744	0.59	-1.2
8,011	-		GFF744	0.59	-0.7
8,011	-		GFF744	0.59	+0.0
8,011	-		GFF744	0.59	+0.7
8,011	-		GFF744	0.59	+2.1
8,011	-		GFF744	0.59	+0.4
8,011	-		GFF744	0.59	+1.7
8,872	+		GFF745	0.47	+1.5
8,872	+		GFF745	0.47	-0.0
8,872	+		GFF745	0.47	+0.2
8,873	-		GFF745	0.47	-1.5
9,055	+		GFF745	0.65	-0.3
9,055	+		GFF745	0.65	+1.8
9,070	+		GFF745	0.67	+1.3
9,070	+		GFF745	0.67	-0.6
9,070	+		GFF745	0.67	+0.2
9,304	+				-1.8
9,305	-				-0.2
9,454	-				-1.0
9,630	+		GFF746	0.22	-0.7
9,834	+		GFF746	0.43	-1.9
9,835	-		GFF746	0.43	-2.0
9,835	-		GFF746	0.43	-1.9
10,060	-		GFF746	0.66	-0.3
10,122	+		GFF746	0.72	-0.5
10,122	+		GFF746	0.72	+0.8
10,123	-		GFF746	0.72	+0.5
10,123	-		GFF746	0.72	+0.1
10,123	-		GFF746	0.72	+3.0
10,123	-		GFF746	0.72	-2.1
10,386	+				+0.5