Strain Fitness in Variovorax sp. SCN45 around GFF6782

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
30,592	+		GFF6781	0.46	+1.7
30,592	+		GFF6781	0.46	-1.6
30,592	+		GFF6781	0.46	-0.3
30,592	+		GFF6781	0.46	-2.5
30,593	-		GFF6781	0.46	-1.2
30,755	+		GFF6781	0.55	-0.3
30,771	-		GFF6781	0.56	-1.6
31,039	+		GFF6781	0.71	-0.5
31,120	+		GFF6781	0.76	-2.1
31,120	+		GFF6781	0.76	-2.3
31,120	+		GFF6781	0.76	-0.6
31,121	-		GFF6781	0.76	-0.8
31,121	-		GFF6781	0.76	+0.1
31,130	+		GFF6781	0.76	-1.3
31,133	-		GFF6781	0.76	-0.5
31,133	-		GFF6781	0.76	+0.7
31,349	-		GFF6781	0.88	-2.9
31,358	-		GFF6781	0.89	-1.2
31,625	+				+0.5
31,625	+				+0.2
31,625	+				+0.1
31,625	+				+1.0
31,625	+				-0.4
31,625	+				+2.7
31,625	+				-1.2
31,625	+				-0.8
31,625	+				+0.5
31,626	-				+0.2
31,626	-				-0.4
31,626	-				+2.0
31,626	-				-0.6
31,626	-				+0.2
31,626	-				+0.5
31,626	-				+1.2
31,626	-				-1.5
31,626	-				+1.3
31,627	+				-1.3
31,646	+				-0.2
31,646	+				-2.4
31,647	-				+0.0
31,661	+				-1.9
31,782	-		GFF6782	0.17	+0.5
31,818	-		GFF6782	0.20	-0.3
31,818	-		GFF6782	0.20	-0.3
31,920	-		GFF6782	0.27	-0.6
32,216	+		GFF6782	0.49	-2.0
32,216	+		GFF6782	0.49	+0.6
32,216	+		GFF6782	0.49	-1.5
32,534	+		GFF6782	0.72	-1.0
32,534	+		GFF6782	0.72	-0.8
32,534	+		GFF6782	0.72	-0.3
32,534	+		GFF6782	0.72	-1.2
32,535	-		GFF6782	0.72	-1.0
32,732	+		GFF6782	0.86	-1.5
32,732	+		GFF6782	0.86	-1.5
32,733	-		GFF6782	0.86	-1.6
32,733	-		GFF6782	0.86	-2.0
32,753	+		GFF6782	0.87	-1.8
33,572	+		GFF6783	0.61	-1.6