Strain Fitness in Variovorax sp. SCN45 around GFF6747

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
60,342	-		GFF6746	0.50	+1.5
60,342	-		GFF6746	0.50	-0.5
60,342	-		GFF6746	0.50	-0.7
60,345	+		GFF6746	0.50	+1.9
60,345	+		GFF6746	0.50	+0.8
60,346	-		GFF6746	0.50	+0.8
60,346	-		GFF6746	0.50	+0.5
60,417	+		GFF6746	0.55	-3.9
60,417	+		GFF6746	0.55	-1.3
60,418	-		GFF6746	0.55	-0.9
60,418	-		GFF6746	0.55	+0.0
60,418	-		GFF6746	0.55	+1.4
60,436	-		GFF6746	0.56	-0.5
60,621	+		GFF6746	0.67	-0.7
60,622	-		GFF6746	0.67	-2.3
60,930	+		GFF6746	0.87	+1.1
60,930	+		GFF6746	0.87	-1.0
60,931	-		GFF6746	0.87	-0.7
61,199	+				+1.7
61,199	+				+0.1
61,199	+				-1.0
61,226	+				+0.8
61,241	+				-0.5
61,241	+				-0.7
61,241	+				+0.2
61,241	+				-0.5
61,242	-				-0.2
61,358	+		GFF6747	0.20	-0.8
61,358	+		GFF6747	0.20	-2.7
61,359	-		GFF6747	0.20	-1.6
61,553	+		GFF6747	0.38	+0.8
61,554	-		GFF6747	0.38	-0.6
61,554	-		GFF6747	0.38	+0.2
61,554	-		GFF6747	0.38	-2.1
61,554	-		GFF6747	0.38	-0.6
61,554	-		GFF6747	0.38	+0.9
61,682	+		GFF6747	0.50	-0.9
61,682	+		GFF6747	0.50	-1.0
61,683	-		GFF6747	0.50	-0.6
61,683	-		GFF6747	0.50	+1.1
61,745	+		GFF6747	0.55	+0.2
61,745	+		GFF6747	0.55	-0.7
61,746	-		GFF6747	0.55	-2.5
61,746	-		GFF6747	0.55	-1.6
61,746	-		GFF6747	0.55	-1.6
62,063	+		GFF6747	0.85	-0.3
62,064	-		GFF6747	0.85	-1.0
62,542	+		GFF6748	0.54	+1.7
62,543	-		GFF6748	0.54	-0.4
62,611	-		GFF6748	0.66	-1.0
62,650	+		GFF6748	0.72	+0.7
62,650	+		GFF6748	0.72	-1.5
62,650	+		GFF6748	0.72	+1.7
62,879	+				+4.7