Strain Fitness in Variovorax sp. SCN45 around GFF6008

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
66,877	+		GFF6007	0.67	+0.3
66,877	+		GFF6007	0.67	+0.2
66,878	-		GFF6007	0.67	+0.6
66,878	-		GFF6007	0.67	+0.8
66,878	-		GFF6007	0.67	+1.0
66,948	+		GFF6007	0.70	-0.5
67,666	-				+0.2
68,061	+		GFF6008	0.31	+0.2
68,062	-		GFF6008	0.31	-2.7
68,062	-		GFF6008	0.31	-0.8
68,350	-		GFF6008	0.68	-1.0
68,350	-		GFF6008	0.68	-0.4
68,350	-		GFF6008	0.68	-1.7
68,641	+				-1.1
68,642	-				-0.7
68,642	-				-0.9
68,695	+				-0.6
68,695	+				+0.2
68,887	+		GFF6009	0.23	-2.3
68,887	+		GFF6009	0.23	-2.1
68,887	+		GFF6009	0.23	-0.6
68,887	+		GFF6009	0.23	-0.1
68,888	-		GFF6009	0.23	+0.3
68,888	-		GFF6009	0.23	+0.3
68,888	-		GFF6009	0.23	-2.5
68,938	+		GFF6009	0.28	-0.6
69,055	+		GFF6009	0.38	-2.2
69,325	+		GFF6009	0.61	-2.1
69,325	+		GFF6009	0.61	+0.8
69,325	+		GFF6009	0.61	+2.6
69,326	-		GFF6009	0.61	+1.3
69,326	-		GFF6009	0.61	+0.6
69,416	-		GFF6009	0.69	+1.4
69,524	-		GFF6009	0.78	-0.2
69,586	+		GFF6009	0.83	-1.8
69,586	+		GFF6009	0.83	-0.4
69,587	-		GFF6009	0.83	+1.0