Strain Fitness in Variovorax sp. SCN45 around GFF5977

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
31,207	+				+0.2
31,207	+				-1.5
31,207	+				+3.2
31,208	-				-1.0
31,208	-				+0.2
31,383	+		GFF5976	0.19	-2.3
31,383	+		GFF5976	0.19	+1.2
31,902	+		GFF5976	0.70	-1.8
31,902	+		GFF5976	0.70	-0.1
31,903	-		GFF5976	0.70	-1.4
31,903	-		GFF5976	0.70	-2.1
32,019	+		GFF5976	0.82	+0.4
32,019	+		GFF5976	0.82	+0.6
32,019	+		GFF5976	0.82	-0.6
32,019	+		GFF5976	0.82	+0.2
32,019	+		GFF5976	0.82	-2.7
32,019	+		GFF5976	0.82	+0.2
32,020	-		GFF5976	0.82	-0.8
32,020	-		GFF5976	0.82	-3.2
32,020	-		GFF5976	0.82	-0.8
32,020	-		GFF5976	0.82	-0.1
32,020	-		GFF5976	0.82	+0.9
32,020	-		GFF5976	0.82	+0.5
32,068	-		GFF5976	0.87	-2.0
32,097	+		GFF5976	0.90	-0.4
32,098	-		GFF5976	0.90	+1.6
32,098	-		GFF5976	0.90	-1.1
32,151	+				-0.8
32,151	+				+1.2
32,151	+				+0.7
32,152	-				-0.8
32,152	-				+1.2
32,152	-				+1.8
32,152	-				-1.1
32,393	+		GFF5977	0.25	+0.5
32,393	+		GFF5977	0.25	-0.5
32,393	+		GFF5977	0.25	-0.4
32,394	-		GFF5977	0.25	+1.9
32,394	-		GFF5977	0.25	+0.2
32,394	-		GFF5977	0.25	-0.5
32,394	-		GFF5977	0.25	-1.3
32,394	-		GFF5977	0.25	-0.8
32,394	-		GFF5977	0.25	-2.1
32,516	+		GFF5977	0.39	-0.1
32,516	+		GFF5977	0.39	-0.0
32,516	+		GFF5977	0.39	-0.4
32,517	-		GFF5977	0.39	-2.6
32,517	-		GFF5977	0.39	+0.0
32,517	-		GFF5977	0.39	+2.0
32,693	+		GFF5977	0.59	+0.5
32,693	+		GFF5977	0.59	-0.1
32,693	+		GFF5977	0.59	+0.8
32,693	+		GFF5977	0.59	-0.3
32,693	+		GFF5977	0.59	-1.1
32,693	+		GFF5977	0.59	-1.6
32,693	+		GFF5977	0.59	-0.4
32,693	-		GFF5977	0.59	-2.3
32,694	-		GFF5977	0.59	+1.3
32,694	-		GFF5977	0.59	+1.5
32,694	-		GFF5977	0.59	-1.6
32,696	+		GFF5977	0.59	+2.5
32,696	+		GFF5977	0.59	-0.6
32,697	-		GFF5977	0.59	+1.7
32,892	-		GFF5977	0.81	-0.1
32,892	-		GFF5977	0.81	-1.0
33,093	-				+0.7
33,331	+		GFF5978	0.38	+0.6
33,331	+		GFF5978	0.38	+0.3
33,331	+		GFF5978	0.38	-0.4
33,332	-		GFF5978	0.38	-1.5
33,332	-		GFF5978	0.38	-2.9
33,332	-		GFF5978	0.38	-0.4
33,352	+		GFF5978	0.42	-0.4
33,490	+		GFF5978	0.66	-0.9
33,490	+		GFF5978	0.66	-3.0
33,490	+		GFF5978	0.66	-0.6
33,490	+		GFF5978	0.66	-1.5
33,490	+		GFF5978	0.66	-1.1
33,490	+		GFF5978	0.66	+0.1
33,491	-		GFF5978	0.67	-1.3
33,491	-		GFF5978	0.67	-0.2
33,637	+				-0.1
33,637	+				+1.2
33,637	+				-0.3
33,637	+				-0.8
33,638	-				-1.8
33,638	-				+0.4
33,693	+				-0.6
33,693	+				+1.9
33,693	+				-2.2
33,693	+				-0.7
33,693	+				+0.2
33,693	+				-0.8
33,694	-				-1.1
33,694	-				+0.9
33,694	-				+2.9
33,698	-				-1.5
33,698	-				-0.6
33,851	+				-0.4