Strain Fitness in Variovorax sp. SCN45 around GFF5917

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
131,487	+		GFF5916	0.17	-1.0
131,640	+		GFF5916	0.32	-1.3
131,640	+		GFF5916	0.32	-1.1
131,640	+		GFF5916	0.32	-2.3
131,641	-		GFF5916	0.32	+2.2
131,738	+		GFF5916	0.41	+0.1
131,738	+		GFF5916	0.41	-0.2
131,840	+		GFF5916	0.51	+0.3
132,475	+		GFF5917	0.13	-2.5
132,483	+		GFF5917	0.15	-1.3
132,484	-		GFF5917	0.15	+1.0
133,266	-		GFF5918	0.20	+0.8
133,266	-		GFF5918	0.20	-2.0
133,400	+		GFF5918	0.29	-1.3
133,400	+		GFF5918	0.29	+0.1
133,401	-		GFF5918	0.29	-0.2
133,631	+		GFF5918	0.45	+0.4
133,673	+		GFF5918	0.47	+0.8
133,787	+		GFF5918	0.55	-0.3
133,788	-		GFF5918	0.55	-2.5
133,788	-		GFF5918	0.55	+0.1
133,839	-		GFF5918	0.59	+1.7
133,839	-		GFF5918	0.59	-0.2