Strain Fitness in Variovorax sp. SCN45 around GFF4242

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
155,861	+				-1.2
155,861	+				-1.7
155,862	-				-1.9
155,862	-				+1.2
156,268	+		GFF4242	0.35	-2.8
156,268	+		GFF4242	0.35	-0.4
156,268	+		GFF4242	0.35	-2.3
156,268	+		GFF4242	0.35	-2.6
156,268	+		GFF4242	0.35	+5.3
156,269	-		GFF4242	0.35	-3.2
156,269	-		GFF4242	0.35	+2.1
156,269	-		GFF4242	0.35	+2.5
156,269	-		GFF4242	0.35	+2.2
156,269	-		GFF4242	0.35	-0.4
156,383	-		GFF4242	0.46	+2.2
156,383	-		GFF4242	0.46	-0.1
156,383	-		GFF4242	0.46	-1.4
156,383	-		GFF4242	0.46	+2.2
156,508	+		GFF4242	0.58	+2.2
156,509	-		GFF4242	0.58	+0.6
156,514	+		GFF4242	0.59	-0.2
156,514	+		GFF4242	0.59	+2.0
156,514	+		GFF4242	0.59	-1.2
156,514	+		GFF4242	0.59	-1.1
156,514	+		GFF4242	0.59	-1.9
156,514	+		GFF4242	0.59	-1.0
156,514	+		GFF4242	0.59	+1.2
156,514	+		GFF4242	0.59	+1.2
156,514	+		GFF4242	0.59	+0.6
156,514	+		GFF4242	0.59	-2.7
156,514	+		GFF4242	0.59	+3.8
156,514	+		GFF4242	0.59	+2.2
156,514	+		GFF4242	0.59	+2.2
156,514	+		GFF4242	0.59	-0.0
156,514	+		GFF4242	0.59	+0.6
156,514	+		GFF4242	0.59	+1.2
156,514	+		GFF4242	0.59	+0.2
156,514	+		GFF4242	0.59	+0.4
156,515	-		GFF4242	0.59	+0.6
156,515	-		GFF4242	0.59	-2.1
156,515	-		GFF4242	0.59	+0.9
156,515	-		GFF4242	0.59	+2.2
156,515	-		GFF4242	0.59	+0.6
156,515	-		GFF4242	0.59	+0.4
156,515	-		GFF4242	0.59	-0.6
156,515	-		GFF4242	0.59	+2.7
156,515	-		GFF4242	0.59	+0.9
156,515	-		GFF4242	0.59	-0.9
156,515	-		GFF4242	0.59	-0.6
156,515	-		GFF4242	0.59	-1.7
156,515	-		GFF4242	0.59	-0.8
156,515	-		GFF4242	0.59	+1.2
156,515	-		GFF4242	0.59	-2.3
156,539	-		GFF4242	0.61	-1.2
156,566	-		GFF4242	0.64	+2.2
156,566	-		GFF4242	0.64	+1.3
156,649	+		GFF4242	0.72	-1.5
156,770	-		GFF4242	0.83	-3.1
156,829	+		GFF4242	0.89	-1.1
156,829	+		GFF4242	0.89	+0.4
156,830	-		GFF4242	0.89	-0.4
156,830	-		GFF4242	0.89	+0.6
156,830	-		GFF4242	0.89	-0.2
156,830	-		GFF4242	0.89	-0.8
156,934	+				+0.8
156,935	-				+0.6
156,935	-				+1.3
156,935	-				+0.7
156,935	-				-2.2
156,935	-				-1.1
156,944	+				+0.6
156,944	+				-0.1
156,944	+				+1.2
156,944	+				-0.4
156,944	+				+2.2
156,945	-				-0.8
156,945	-				-1.8
156,945	-				-0.6
156,974	+				-0.1
156,974	+				+2.2
156,974	+				-1.1
156,974	+				+2.2
156,974	+				+0.6
156,974	+				-0.6
156,974	+				+0.2
156,975	-				+2.2
156,975	-				+0.6
156,975	-				+2.2
156,975	-				+2.2
156,985	+				-0.9
156,985	+				-1.1
156,986	-				+2.1
156,986	-				-1.1
156,986	-				+0.2
156,986	-				+0.2
157,037	+				+3.8
157,037	+				+0.2
157,037	+				+1.2
157,038	-				+1.8
157,038	-				+0.1
157,038	-				+0.3
157,315	+				-0.8
157,407	+				+0.8
157,407	+				+0.4
157,408	-				+1.8
157,408	-				-0.9
157,413	-				-0.6
157,414	+				+0.9
157,479	-				+0.3
157,493	+				-0.4
157,504	+				+0.2
157,505	-				+1.4
157,505	-				-1.2
157,505	-				-0.9
157,505	-				-0.7
157,509	-				-2.6
157,516	-				-1.4
157,539	-				-1.4
157,723	+				-0.6
157,724	-				+1.1
157,724	-				+2.2
157,741	+				+1.8
157,741	+				-2.7
157,742	-				+1.5
157,742	-				-1.9
157,742	-				+0.6
157,742	-				+2.4
157,742	-				-0.4
157,743	+				-0.8
157,743	+				+1.1
157,744	-				+0.6
157,744	-				-0.8
157,744	-				-2.1
157,744	-				-1.1
157,745	+				+0.2
157,745	+				-0.6
157,745	+				+0.6
157,745	+				-0.0
157,745	+				-2.1
157,745	+				-2.2
157,745	+				-1.3
157,746	-				-0.6
157,746	-				-2.6
157,746	-				-2.4
157,746	-				+1.7
157,746	-				+0.2
157,746	-				-1.8
157,746	-				+0.1
157,775	+				+0.1
157,775	+				-0.4
157,775	+				+0.4
157,775	+				+0.2
157,776	-				-1.4
157,776	-				+0.4
157,776	-				+1.6