Strain Fitness in Variovorax sp. SCN45 around GFF4196

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
110,498	+		GFF4195	0.23	-2.3
110,615	+		GFF4195	0.36	-0.2
110,615	+		GFF4195	0.36	-0.1
110,616	-		GFF4195	0.36	+1.1
110,706	+		GFF4195	0.45	-1.4
110,707	-		GFF4195	0.45	-0.7
110,844	-		GFF4195	0.59	+1.9
110,939	+		GFF4195	0.69	+1.5
110,939	+		GFF4195	0.69	-0.2
110,939	+		GFF4195	0.69	-0.7
111,017	+		GFF4195	0.78	-1.6
111,018	-		GFF4195	0.78	-0.5
111,277	+				+1.5
111,277	+				-2.4
111,277	+				+0.6
111,278	-				-0.6
111,594	-		GFF4196	0.25	-0.6
111,859	-		GFF4196	0.55	-2.4
112,086	+		GFF4196	0.81	+0.5
112,086	+		GFF4196	0.81	-0.1
112,131	+		GFF4196	0.86	-0.8
112,132	-		GFF4196	0.86	+2.6
112,132	-		GFF4196	0.86	+0.0
112,132	-		GFF4196	0.86	+0.6
112,285	-				-1.6
112,635	+		GFF4197	0.41	+0.2
112,636	-		GFF4197	0.41	-3.9