Strain Fitness in Variovorax sp. SCN45 around GFF3325

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
151,106	-		GFF3324	0.37	-1.9
151,430	+		GFF3324	0.61	-1.0
151,430	+		GFF3324	0.61	+0.0
151,430	+		GFF3324	0.61	-0.2
151,431	-		GFF3324	0.61	+0.1
151,431	-		GFF3324	0.61	-0.1
151,431	-		GFF3324	0.61	-0.5
151,431	-		GFF3324	0.61	-0.5
151,431	-		GFF3324	0.61	+1.0
151,657	+		GFF3324	0.77	+2.0
151,658	-		GFF3324	0.77	+1.2
151,658	-		GFF3324	0.77	+0.3
151,658	-		GFF3324	0.77	-2.3
151,717	+		GFF3324	0.81	+0.4
151,732	-		GFF3324	0.82	-0.8
152,122	+		GFF3325	0.16	-3.0
152,123	-		GFF3325	0.17	+0.4
152,232	+		GFF3325	0.31	-2.7
152,233	-		GFF3325	0.31	+0.2
152,377	+		GFF3325	0.50	+0.8
152,378	-		GFF3325	0.50	+1.4
152,378	-		GFF3325	0.50	+0.2
152,378	-		GFF3325	0.50	+1.1
152,434	+		GFF3325	0.58	-2.5
152,434	+		GFF3325	0.58	+0.0
152,434	+		GFF3325	0.58	-0.4
152,435	-		GFF3325	0.58	+0.1
152,686	+				+2.0
152,687	-				+1.5
152,687	-				-1.4
152,708	-				-0.7
152,820	+		GFF3326	0.13	-1.6
152,820	+		GFF3326	0.13	-1.3
152,820	+		GFF3326	0.13	+0.3
152,821	-		GFF3326	0.13	+0.1
152,821	-		GFF3326	0.13	+1.7
152,886	+		GFF3326	0.27	+0.6
152,887	-		GFF3326	0.27	-1.2
152,887	-		GFF3326	0.27	+0.3
152,887	-		GFF3326	0.27	-1.5
153,135	+		GFF3326	0.81	-0.7
153,136	-		GFF3326	0.81	-0.5
153,153	-		GFF3326	0.85	-0.0
153,497	+		GFF3327	0.57	+1.6
153,497	+		GFF3327	0.57	+0.1
153,498	-		GFF3327	0.57	+1.2
153,498	-		GFF3327	0.57	-2.4