Strain Fitness in Variovorax sp. SCN45 around GFF2660

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
81,352	+				+0.8
81,352	+				-0.9
81,352	+				-1.5
81,353	-				-0.7
81,638	+		GFF2659	0.24	-1.7
81,638	+		GFF2659	0.24	-1.2
82,094	+		GFF2659	0.73	-1.8
82,094	+		GFF2659	0.73	+0.1
82,094	+		GFF2659	0.73	-1.5
83,151	+				+0.3
83,152	-				-1.5
83,152	-				-0.7
83,152	-				-1.8
83,152	-				+1.3
83,234	+				-0.4
83,234	+				-1.4
83,234	+				-1.7
83,236	+				+3.1
83,236	+				-2.1
83,236	+				+0.9
83,237	-				-2.5
83,237	-				-1.4
83,237	-				-0.1
83,237	-				-0.5
83,310	+				-1.4
83,310	+				+0.2
83,310	+				+1.9
83,311	-				+1.9
83,311	-				-0.6
83,311	-				+1.1
83,538	-		GFF2661	0.24	+0.5
83,667	-		GFF2661	0.34	-0.2
83,769	-		GFF2661	0.42	-1.2
83,769	-		GFF2661	0.42	+4.9
83,769	-		GFF2661	0.42	-0.2
83,974	-		GFF2661	0.58	+1.3