Experiment: Community=guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2033 and GFF2034 are separated by 107 nucleotides GFF2034 and GFF2035 are separated by 11 nucleotides
GFF2033 - no description, at 80,915 to 81,871
GFF2033
GFF2034 - BUG/TctC family periplasmic protein, at 81,979 to 82,965
GFF2034
GFF2035 - N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14), at 82,977 to 84,185
GFF2035
Position (kb) 81
82
83 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 81.119 kb on + strand, within GFF2033 at 81.120 kb on - strand, within GFF2033 at 81.323 kb on + strand, within GFF2033 at 81.323 kb on + strand, within GFF2033 at 81.323 kb on + strand, within GFF2033 at 81.323 kb on + strand, within GFF2033 at 81.324 kb on - strand, within GFF2033 at 81.324 kb on - strand, within GFF2033 at 81.324 kb on - strand, within GFF2033 at 81.837 kb on + strand at 81.837 kb on + strand at 81.837 kb on + strand at 81.837 kb on + strand at 81.912 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.940 kb on + strand at 81.941 kb on - strand at 81.941 kb on - strand at 81.941 kb on - strand at 81.941 kb on - strand at 82.246 kb on + strand, within GFF2034 at 82.246 kb on + strand, within GFF2034 at 82.444 kb on + strand, within GFF2034 at 82.444 kb on + strand, within GFF2034 at 82.444 kb on + strand, within GFF2034 at 82.444 kb on + strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.445 kb on - strand, within GFF2034 at 82.603 kb on + strand, within GFF2034 at 82.603 kb on + strand, within GFF2034 at 82.603 kb on + strand, within GFF2034 at 82.621 kb on + strand, within GFF2034 at 82.622 kb on - strand, within GFF2034 at 82.622 kb on - strand, within GFF2034 at 82.622 kb on - strand, within GFF2034 at 83.078 kb on + strand at 83.078 kb on + strand at 83.078 kb on + strand at 83.079 kb on - strand at 83.079 kb on - strand at 83.079 kb on - strand at 83.286 kb on + strand, within GFF2035 at 83.287 kb on - strand, within GFF2035 at 83.287 kb on - strand, within GFF2035 at 83.874 kb on - strand, within GFF2035 at 83.874 kb on - strand, within GFF2035 at 83.874 kb on - strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.889 kb on + strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.890 kb on - strand, within GFF2035 at 83.901 kb on + strand, within GFF2035
Per-strain Table
Position Strand Gene LocusTag Fraction Community=guar; Passage=4 remove 81,119 + GFF2033 0.21 -1.1 81,120 - GFF2033 0.21 -0.4 81,323 + GFF2033 0.43 +2.4 81,323 + GFF2033 0.43 +1.4 81,323 + GFF2033 0.43 +0.5 81,323 + GFF2033 0.43 +1.7 81,324 - GFF2033 0.43 -1.4 81,324 - GFF2033 0.43 +1.3 81,324 - GFF2033 0.43 +0.7 81,837 + -0.4 81,837 + +0.7 81,837 + -3.7 81,837 + -1.0 81,912 + -0.4 81,940 + +0.6 81,940 + -2.4 81,940 + +2.4 81,940 + +0.0 81,940 + -0.5 81,940 + +0.9 81,940 + +0.2 81,940 + -0.2 81,940 + -1.9 81,940 + -0.3 81,941 - +0.0 81,941 - -0.4 81,941 - -1.9 81,941 - -1.4 82,246 + GFF2034 0.27 -3.3 82,246 + GFF2034 0.27 -0.2 82,444 + GFF2034 0.47 +0.0 82,444 + GFF2034 0.47 -1.5 82,444 + GFF2034 0.47 -1.4 82,444 + GFF2034 0.47 -0.4 82,445 - GFF2034 0.47 +0.8 82,445 - GFF2034 0.47 -0.4 82,445 - GFF2034 0.47 -1.3 82,445 - GFF2034 0.47 +0.9 82,445 - GFF2034 0.47 +1.4 82,445 - GFF2034 0.47 -1.1 82,445 - GFF2034 0.47 -0.8 82,445 - GFF2034 0.47 -2.3 82,603 + GFF2034 0.63 -2.6 82,603 + GFF2034 0.63 -1.0 82,603 + GFF2034 0.63 -0.5 82,621 + GFF2034 0.65 -0.8 82,622 - GFF2034 0.65 +0.8 82,622 - GFF2034 0.65 -1.4 82,622 - GFF2034 0.65 -1.9 83,078 + +0.6 83,078 + -2.0 83,078 + +2.4 83,079 - -2.8 83,079 - +0.0 83,079 - -2.4 83,286 + GFF2035 0.26 -0.9 83,287 - GFF2035 0.26 +0.4 83,287 - GFF2035 0.26 +0.0 83,874 - GFF2035 0.74 -2.0 83,874 - GFF2035 0.74 -3.8 83,874 - GFF2035 0.74 +0.8 83,889 + GFF2035 0.75 -0.2 83,889 + GFF2035 0.75 +0.7 83,889 + GFF2035 0.75 -0.6 83,889 + GFF2035 0.75 -0.4 83,889 + GFF2035 0.75 -0.3 83,889 + GFF2035 0.75 +0.8 83,890 - GFF2035 0.76 +2.4 83,890 - GFF2035 0.76 -0.8 83,890 - GFF2035 0.76 -1.3 83,890 - GFF2035 0.76 +0.9 83,890 - GFF2035 0.76 +0.2 83,890 - GFF2035 0.76 -1.2 83,901 + GFF2035 0.76 -1.3
Or see this region's nucleotide sequence