Strain Fitness in Variovorax sp. SCN45 around GFF1553

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
151,304	+				+0.1
151,305	-				-0.0
151,691	+		GFF1552	0.52	+2.2
151,691	+		GFF1552	0.52	-1.2
151,692	-		GFF1552	0.52	-1.6
151,692	-		GFF1552	0.52	-0.4
151,907	+		GFF1552	0.79	-1.2
151,926	-		GFF1552	0.81	+0.1
152,117	+				-2.0
152,118	-				+1.3
152,281	+		GFF1553	0.20	+1.6
152,359	+		GFF1553	0.34	+1.0
152,360	-		GFF1553	0.34	-0.3
152,395	+		GFF1553	0.41	+1.3
152,395	+		GFF1553	0.41	+1.9
152,395	+		GFF1553	0.41	-2.2
152,395	+		GFF1553	0.41	-1.4
152,396	-		GFF1553	0.41	+0.2
152,396	-		GFF1553	0.41	-1.2
152,396	-		GFF1553	0.41	-1.4
152,396	-		GFF1553	0.41	+1.6
152,548	+		GFF1553	0.69	+0.0
152,548	+		GFF1553	0.69	-0.8
152,548	+		GFF1553	0.69	-2.0
152,549	-		GFF1553	0.69	-0.9
152,672	-				+3.6
152,679	+				-1.5
152,689	-				-0.8
152,697	+				-0.6
152,697	+				+0.4
152,698	-				+0.3
152,698	-				-0.5
152,733	+				+1.1
152,734	-				-1.9
152,734	-				-1.7
153,032	+		GFF1554	0.55	-0.7
153,383	+				-0.7
153,384	-				+2.6
153,404	-				-0.5
153,411	+				+0.6
153,411	+				+0.1
153,411	+				-0.7
153,412	-				-2.7
153,412	-				-1.4