Strain Fitness in Variovorax sp. SCN45 around GFF1413

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
1,860	-		GFF1412	0.71	-1.6
1,870	+		GFF1412	0.71	-0.9
1,991	-		GFF1412	0.77	+1.3
2,366	+				+2.9
2,650	+				-0.1
2,651	-				-0.5
2,651	-				-0.4
2,654	+				+2.1
2,655	-				-0.5
2,655	-				+0.0
2,668	+				+0.2
2,669	-				+0.5
2,669	-				+0.5
2,877	-		GFF1413	0.22	+1.2
2,993	+		GFF1413	0.28	-0.2
3,134	+		GFF1413	0.37	-1.6
3,273	-		GFF1413	0.45	-0.2
3,505	-		GFF1413	0.58	+3.1
3,810	+		GFF1413	0.76	-2.6
3,973	-		GFF1413	0.86	+2.0
4,053	-				-2.1
4,442	-		GFF1414	0.16	+0.1
4,442	-		GFF1414	0.16	+0.4
4,528	+		GFF1414	0.21	-0.3
4,529	-		GFF1414	0.21	-0.8
4,675	-		GFF1414	0.31	-0.0