Strain Fitness in Variovorax sp. SCN45 around GFF72

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
88,287	+				+0.4
88,287	+				-1.9
88,288	-				+1.3
88,288	-				-1.6
88,288	-				+2.7
88,446	+				+1.2
88,526	-		GFF71	0.14	-0.6
88,526	-		GFF71	0.14	-1.4
88,795	+		GFF71	0.48	-0.1
88,795	+		GFF71	0.48	+1.4
88,796	-		GFF71	0.48	-1.6
89,232	+				+0.6
89,449	+		GFF72	0.18	-1.1
89,449	+		GFF72	0.18	-1.6
89,449	+		GFF72	0.18	+2.1
89,449	+		GFF72	0.18	-1.5
89,449	+		GFF72	0.18	-1.9
89,449	+		GFF72	0.18	+2.0
89,450	-		GFF72	0.18	+1.4
89,450	-		GFF72	0.18	-1.2
89,450	-		GFF72	0.18	-1.9
89,671	+		GFF72	0.38	+1.8
89,671	+		GFF72	0.38	+2.0
89,671	+		GFF72	0.38	-0.8
89,671	+		GFF72	0.38	-1.6
89,671	+		GFF72	0.38	-0.2
89,672	-		GFF72	0.38	+1.1
89,672	-		GFF72	0.38	+3.8
89,672	-		GFF72	0.38	+1.2
90,134	-		GFF72	0.78	+1.4
90,495	+		GFF73	0.17	+0.3
90,496	-		GFF73	0.18	-1.6
90,496	-		GFF73	0.18	+0.6
90,534	+		GFF73	0.23	-3.6
90,535	-		GFF73	0.23	+0.9
90,621	+		GFF73	0.37	-4.0
90,621	+		GFF73	0.37	+0.9
90,873	+		GFF73	0.75	+0.1
90,873	+		GFF73	0.75	-0.6
90,873	+		GFF73	0.75	-0.2
90,873	+		GFF73	0.75	+1.1
90,873	+		GFF73	0.75	+1.0
90,874	-		GFF73	0.75	-2.7
90,874	-		GFF73	0.75	+0.4
90,874	-		GFF73	0.75	-1.7
90,874	-		GFF73	0.75	+0.3
90,889	-		GFF73	0.77	+0.2
90,903	+		GFF73	0.79	+0.4
91,052	+				-2.4
91,052	+				-1.4
91,052	+				+0.4
91,053	-				-0.0
91,053	-				-0.6
91,099	+				+1.4