Strain Fitness in Variovorax sp. SCN45 around GFF6980

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
51,522	-				-0.4
51,617	-				-2.3
51,617	-				+1.0
51,688	+				-2.4
51,691	+				+1.5
52,088	-				+2.0
52,167	+				+0.0
52,168	-				+0.7
52,180	-				+0.5
52,205	+				-1.0
52,206	-				-1.8
52,999	+		GFF6980	0.74	-3.6
52,999	+		GFF6980	0.74	-3.3
53,000	-		GFF6980	0.74	+0.5
53,000	-		GFF6980	0.74	-1.6
53,000	-		GFF6980	0.74	-0.8
53,318	+				+1.0
53,389	-				+0.0