Strain Fitness in Variovorax sp. SCN45 around GFF6928

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
6,087	+		GFF6926	0.37	-0.5
6,087	+		GFF6926	0.37	+1.0
6,186	+		GFF6926	0.48	+1.2
6,187	-		GFF6926	0.49	+0.8
6,478	-		GFF6926	0.81	-0.8
6,478	-		GFF6926	0.81	+0.6
6,478	-		GFF6926	0.81	+0.2
6,531	+		GFF6926	0.87	+0.0
6,532	-		GFF6926	0.87	-0.0
6,588	+				-1.7
6,588	+				-1.8
6,588	+				-2.6
6,588	+				+0.9
6,588	+				+1.8
6,588	+				+0.2
6,589	-				-0.5
6,589	-				-0.5
6,589	-				+1.9
6,589	-				+0.2
6,930	+		GFF6927	0.60	+0.5
6,930	+		GFF6927	0.60	-0.3
6,931	-		GFF6927	0.61	-1.0
6,931	-		GFF6927	0.61	+1.0
6,931	-		GFF6927	0.61	+0.0
6,984	-		GFF6927	0.77	+0.6
6,984	-		GFF6927	0.77	+0.9
7,028	+				-0.8
7,029	-				-3.1
7,037	+				-3.5
7,037	+				-2.4
7,037	+				-0.8
7,037	+				+1.4
7,037	+				-1.1
7,261	+		GFF6928	0.47	+1.5
7,262	-		GFF6928	0.47	-0.1
7,262	-		GFF6928	0.47	-1.9
7,262	-		GFF6928	0.47	-1.7
7,262	-		GFF6928	0.47	-0.8
8,134	-		GFF6930	0.45	+1.0
8,239	-		GFF6930	0.68	+0.0