Strain Fitness in Variovorax sp. SCN45 around GFF5954

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
9,074	+		GFF5953	0.31	+0.2
9,227	+		GFF5953	0.48	+0.3
9,228	-		GFF5953	0.49	+1.1
9,290	+		GFF5953	0.56	-1.5
9,494	+		GFF5953	0.79	-1.9
9,494	+		GFF5953	0.79	-3.0
9,494	+		GFF5953	0.79	-1.8
9,497	+		GFF5953	0.80	+1.4
9,497	+		GFF5953	0.80	+2.8
9,497	+		GFF5953	0.80	-2.5
9,497	+		GFF5953	0.80	-1.8
9,497	+		GFF5953	0.80	+3.5
9,498	-		GFF5953	0.80	-0.3
9,942	+		GFF5954	0.24	+0.0
9,943	-		GFF5954	0.24	+0.2
10,231	+		GFF5954	0.50	+0.3
10,564	+		GFF5954	0.79	-3.1
10,565	-		GFF5954	0.79	-2.1
10,565	-		GFF5954	0.79	-1.9
10,565	-		GFF5954	0.79	+1.4
10,577	-		GFF5954	0.80	+0.8
10,616	-		GFF5954	0.84	-2.6
10,616	-		GFF5954	0.84	+2.2
10,794	+				-0.5
10,795	+				-0.5
10,795	+				-1.2
10,795	+				-3.7
10,795	+				-1.2
10,795	+				-0.6
10,796	-				-2.8
10,796	-				-2.6
10,861	+				-0.4
10,862	-				-1.6
10,862	-				+0.0
10,862	-				-0.5
10,862	-				+0.1
10,862	-				+0.8
11,054	+		GFF5955	0.22	-1.3
11,055	-		GFF5955	0.22	+1.0
11,576	+		GFF5955	0.78	+0.2
11,576	+		GFF5955	0.78	-2.3
11,576	+		GFF5955	0.78	-0.5
11,577	-		GFF5955	0.79	-0.4
11,582	+		GFF5955	0.79	-1.6
11,582	+		GFF5955	0.79	+4.3
11,582	+		GFF5955	0.79	+0.8
11,583	-		GFF5955	0.79	+0.8
11,583	-		GFF5955	0.79	-1.7
11,583	-		GFF5955	0.79	-2.0
11,583	-		GFF5955	0.79	-2.0