Strain Fitness in Variovorax sp. SCN45 around GFF5686

Experiment: Community=guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=guar; Passage=4
61,719	+		GFF5685	0.24	+0.3
61,719	+		GFF5685	0.24	+1.0
61,719	+		GFF5685	0.24	+0.6
61,720	-		GFF5685	0.24	+1.9
61,720	-		GFF5685	0.24	-0.2
61,720	-		GFF5685	0.24	-0.9
61,720	-		GFF5685	0.24	-2.5
61,720	-		GFF5685	0.24	-1.6
61,722	+		GFF5685	0.24	-1.5
61,723	-		GFF5685	0.24	-0.4
61,723	-		GFF5685	0.24	+0.9
61,830	+		GFF5685	0.37	-1.3
61,830	+		GFF5685	0.37	+1.2
61,831	-		GFF5685	0.37	+0.3
61,872	+		GFF5685	0.43	+1.7
61,872	+		GFF5685	0.43	-0.2
62,449	+		GFF5686	0.22	+0.9
62,710	+		GFF5686	0.87	+1.3
62,710	+		GFF5686	0.87	-0.4
62,711	-		GFF5686	0.88	+0.3
62,711	-		GFF5686	0.88	-0.4
62,711	-		GFF5686	0.88	+0.6
62,810	+		GFF5687	0.10	+1.0
63,032	+		GFF5687	0.50	+0.1
63,032	+		GFF5687	0.50	-0.2
63,032	+		GFF5687	0.50	+0.4
63,032	+		GFF5687	0.50	+2.4
63,033	-		GFF5687	0.51	+0.8
63,033	-		GFF5687	0.51	-2.9
63,359	+				-2.7
63,359	+				-3.1
63,359	+				+0.6
63,360	-				-0.7
63,360	-				-0.7
63,360	-				-0.1
63,360	-				-0.5
63,360	-				-0.5
63,534	-		GFF5688	0.12	+1.5
63,728	+		GFF5688	0.33	+2.8
63,728	+		GFF5688	0.33	-0.7
63,728	+		GFF5688	0.33	+0.2
63,729	-		GFF5688	0.33	-1.1
63,729	-		GFF5688	0.33	-3.3
63,729	-		GFF5688	0.33	+0.5
63,729	-		GFF5688	0.33	+0.9