Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7180 and GFF7181 are separated by 273 nucleotides
GFF7180 - no description, at 44,655 to 45,350
GFF7180
GFF7181 - no description, at 45,624 to 45,743
GFF7181
Position (kb) 45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.704 kb on + strand at 44.705 kb on - strand at 45.135 kb on + strand, within GFF7180 at 45.136 kb on - strand, within GFF7180 at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.335 kb on + strand at 45.377 kb on + strand at 45.377 kb on + strand at 45.384 kb on + strand at 45.384 kb on + strand at 45.384 kb on + strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.385 kb on - strand at 45.421 kb on - strand at 45.441 kb on + strand at 45.442 kb on - strand at 45.442 kb on - strand at 45.479 kb on - strand at 45.479 kb on - strand at 45.479 kb on - strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.509 kb on + strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.510 kb on - strand at 45.537 kb on + strand at 45.538 kb on - strand at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.642 kb on + strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.643 kb on - strand, within GFF7181 at 45.710 kb on - strand, within GFF7181
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 44,641 + -0.5 44,641 + +1.8 44,641 + -1.7 44,641 + -2.5 44,641 + -1.9 44,641 + -0.7 44,642 - -2.1 44,642 - +0.1 44,642 - +0.9 44,642 - +0.6 44,704 + -0.5 44,705 - -2.8 45,135 + GFF7180 0.69 +0.1 45,136 - GFF7180 0.69 +0.1 45,296 + -1.1 45,296 + -0.3 45,296 + -0.6 45,296 + -0.1 45,297 - -2.4 45,297 - -1.4 45,297 - -1.9 45,297 - -2.0 45,297 - +1.7 45,335 + +0.1 45,377 + -1.3 45,377 + +0.3 45,384 + +0.4 45,384 + -1.3 45,384 + -1.5 45,385 - -1.9 45,385 - -1.8 45,385 - +0.1 45,385 - -0.1 45,421 - +0.5 45,441 + +0.8 45,442 - -0.9 45,442 - -0.5 45,479 - -0.9 45,479 - +0.0 45,479 - -0.7 45,509 + -1.0 45,509 + -0.5 45,509 + -1.0 45,509 + +0.5 45,510 - -1.5 45,510 - -3.5 45,510 - -1.8 45,510 - -1.6 45,510 - +0.3 45,537 + +0.1 45,538 - -0.0 45,642 + GFF7181 0.15 +0.9 45,642 + GFF7181 0.15 -0.3 45,642 + GFF7181 0.15 +0.2 45,642 + GFF7181 0.15 +0.5 45,642 + GFF7181 0.15 -0.6 45,642 + GFF7181 0.15 -0.5 45,642 + GFF7181 0.15 -2.0 45,642 + GFF7181 0.15 -2.1 45,643 - GFF7181 0.16 +0.3 45,643 - GFF7181 0.16 -1.4 45,643 - GFF7181 0.16 -1.9 45,643 - GFF7181 0.16 -2.6 45,710 - GFF7181 0.72 +1.6
Or see this region's nucleotide sequence