Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4683 and GFF4684 are separated by 86 nucleotides GFF4684 and GFF4685 are separated by 4 nucleotides
GFF4683 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 41,700 to 44,015
GFF4683
GFF4684 - Na+/H+ antiporter, at 44,102 to 45,355
GFF4684
GFF4685 - Copper sensory histidine kinase CusS, at 45,360 to 46,688
GFF4685
Position (kb) 44
45
46 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.332 kb on + strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.333 kb on - strand, within GFF4683 at 43.669 kb on - strand, within GFF4683 at 43.669 kb on - strand, within GFF4683 at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.057 kb on + strand at 44.058 kb on - strand at 44.089 kb on + strand at 44.089 kb on + strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.090 kb on - strand at 44.097 kb on - strand at 44.402 kb on + strand, within GFF4684 at 44.403 kb on - strand, within GFF4684 at 44.403 kb on - strand, within GFF4684 at 44.465 kb on + strand, within GFF4684 at 45.512 kb on - strand, within GFF4685 at 45.678 kb on + strand, within GFF4685 at 45.679 kb on - strand, within GFF4685 at 45.757 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.027 kb on + strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.028 kb on - strand, within GFF4685 at 46.303 kb on - strand, within GFF4685
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 43,332 + GFF4683 0.70 +0.7 43,332 + GFF4683 0.70 -0.8 43,332 + GFF4683 0.70 +0.9 43,332 + GFF4683 0.70 -0.9 43,332 + GFF4683 0.70 -2.5 43,332 + GFF4683 0.70 -1.1 43,332 + GFF4683 0.70 +0.1 43,332 + GFF4683 0.70 -2.9 43,333 - GFF4683 0.71 +0.1 43,333 - GFF4683 0.71 +0.9 43,333 - GFF4683 0.71 +1.8 43,333 - GFF4683 0.71 -0.3 43,333 - GFF4683 0.71 +0.4 43,333 - GFF4683 0.71 -1.9 43,669 - GFF4683 0.85 -0.8 43,669 - GFF4683 0.85 -1.0 44,057 + -1.7 44,057 + +0.7 44,057 + -1.4 44,057 + -2.3 44,057 + -1.4 44,058 - +1.1 44,089 + +0.4 44,089 + +1.8 44,090 - -0.8 44,090 - -0.7 44,090 - +4.0 44,090 - -0.4 44,090 - +1.8 44,090 - -0.0 44,097 - -1.2 44,402 + GFF4684 0.24 +1.4 44,403 - GFF4684 0.24 +1.8 44,403 - GFF4684 0.24 +1.2 44,465 + GFF4684 0.29 +0.3 45,512 - GFF4685 0.11 +0.4 45,678 + GFF4685 0.24 -0.7 45,679 - GFF4685 0.24 +0.2 45,757 + GFF4685 0.30 -2.7 46,027 + GFF4685 0.50 +2.6 46,027 + GFF4685 0.50 -1.9 46,027 + GFF4685 0.50 -2.7 46,027 + GFF4685 0.50 -1.0 46,027 + GFF4685 0.50 +0.1 46,028 - GFF4685 0.50 -1.9 46,028 - GFF4685 0.50 +0.4 46,028 - GFF4685 0.50 -0.3 46,028 - GFF4685 0.50 -1.2 46,028 - GFF4685 0.50 -1.0 46,028 - GFF4685 0.50 -0.2 46,028 - GFF4685 0.50 -1.3 46,028 - GFF4685 0.50 -0.6 46,303 - GFF4685 0.71 -1.2
Or see this region's nucleotide sequence