Strain Fitness in Variovorax sp. SCN45 around GFF4414

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
50,026	+		GFF4412	0.78	-1.2
50,026	+		GFF4412	0.78	-0.9
50,026	+		GFF4412	0.78	-1.0
50,026	+		GFF4412	0.78	+1.6
50,026	+		GFF4412	0.78	+0.5
50,026	+		GFF4412	0.78	-0.4
50,026	+		GFF4412	0.78	-1.8
50,026	+		GFF4412	0.78	-1.1
50,026	+		GFF4412	0.78	-0.9
50,026	+		GFF4412	0.78	-2.4
50,026	+		GFF4412	0.78	-2.8
50,027	-		GFF4412	0.78	-0.1
50,027	-		GFF4412	0.78	+0.5
50,027	-		GFF4412	0.78	-2.5
50,027	-		GFF4412	0.78	-0.4
50,027	-		GFF4412	0.78	+0.2
50,027	-		GFF4412	0.78	-0.5
50,027	-		GFF4412	0.78	-0.6
50,027	-		GFF4412	0.78	+1.2
50,027	-		GFF4412	0.78	+0.1
50,091	+		GFF4412	0.81	-1.4
50,091	+		GFF4412	0.81	+2.0
50,091	+		GFF4412	0.81	+0.2
50,092	-		GFF4412	0.81	-2.2
50,092	-		GFF4412	0.81	-1.6
50,092	-		GFF4412	0.81	+0.4
50,092	-		GFF4412	0.81	-0.2
50,094	+		GFF4412	0.81	+0.5
50,094	+		GFF4412	0.81	+2.8
50,094	+		GFF4412	0.81	-0.3
50,094	+		GFF4412	0.81	+0.7
50,166	+		GFF4412	0.85	-1.6
50,166	+		GFF4412	0.85	-1.1
50,167	-		GFF4412	0.85	-1.0
50,167	-		GFF4412	0.85	-2.4
50,311	+				-2.4
50,311	+				-1.0
50,311	+				-2.1
50,311	+				-1.6
50,312	-				+2.4
50,312	-				-2.9
50,312	-				-0.4
50,312	-				+1.1
50,328	+				-0.1
50,328	+				+0.6
50,328	+				-2.0
50,328	+				-0.7
50,328	+				-0.9
50,328	+				+0.2
50,329	-				+0.1
50,329	-				-0.1
50,329	-				-0.4
50,476	+				+0.6
50,476	+				+0.1
50,476	+				+0.6
50,476	+				-0.9
50,476	+				-1.8
50,476	+				-0.4
50,476	+				-0.6
50,476	+				+0.8
50,476	+				-1.8
50,476	+				+0.6
50,476	+				-1.4
50,476	+				-2.2
50,477	-				-3.0
50,477	-				+0.6
50,477	-				+0.4
50,477	-				+0.1
50,477	-				-0.6
50,477	-				+0.4
50,477	-				-1.9
50,477	-				-0.4
50,477	-				+0.3
50,477	-				-1.5
50,477	-				-2.3
50,477	-				-0.3
50,498	+				+1.0
50,499	-				+1.0
50,515	+				+0.4
50,515	+				-3.1
50,686	+		GFF4413	0.44	-1.8
50,686	+		GFF4413	0.44	+1.8
50,686	+		GFF4413	0.44	+1.4
50,687	-		GFF4413	0.44	+0.1
50,687	-		GFF4413	0.44	-0.6
50,687	-		GFF4413	0.44	-0.6
50,687	-		GFF4413	0.44	-1.4
50,738	+		GFF4413	0.55	-1.8
50,741	+		GFF4413	0.55	-0.2
50,741	+		GFF4413	0.55	+1.2
50,741	+		GFF4413	0.55	-2.2
50,742	-		GFF4413	0.56	+0.3
50,742	-		GFF4413	0.56	+0.8
50,742	-		GFF4413	0.56	-0.7
50,742	-		GFF4413	0.56	+0.1
50,742	-		GFF4413	0.56	-3.0
50,742	-		GFF4413	0.56	-0.5
50,742	-		GFF4413	0.56	+0.7
50,742	-		GFF4413	0.56	-2.5
50,742	-		GFF4413	0.56	-0.3
50,742	-		GFF4413	0.56	-0.8
50,742	-		GFF4413	0.56	-2.0
50,742	-		GFF4413	0.56	-1.1
50,874	+		GFF4413	0.83	-0.1
50,874	+		GFF4413	0.83	-2.3
50,874	+		GFF4413	0.83	-2.8
50,874	+		GFF4413	0.83	-0.1
50,874	+		GFF4413	0.83	-1.8
50,874	+		GFF4413	0.83	-0.5
50,874	+		GFF4413	0.83	+1.2
50,874	+		GFF4413	0.83	-0.9
50,874	+		GFF4413	0.83	+2.6
50,875	-		GFF4413	0.83	+0.0
50,875	-		GFF4413	0.83	-0.6
50,875	-		GFF4413	0.83	-0.4
50,875	-		GFF4413	0.83	-1.0
50,875	-		GFF4413	0.83	-1.6
50,875	-		GFF4413	0.83	-1.6
50,875	-		GFF4413	0.83	+1.0
50,875	-		GFF4413	0.83	-2.6
51,069	-		GFF4414	0.11	-0.8
51,337	+		GFF4414	0.36	-2.0
51,337	+		GFF4414	0.36	+1.1
51,338	-		GFF4414	0.36	-2.0
51,338	-		GFF4414	0.36	-1.4
51,338	-		GFF4414	0.36	+0.6
51,474	-		GFF4414	0.49	+0.4
51,474	-		GFF4414	0.49	-0.1
51,474	-		GFF4414	0.49	+0.9
51,474	-		GFF4414	0.49	+0.8
51,889	+		GFF4414	0.88	+0.2
51,983	+				-0.6
51,984	-				-0.1
51,984	-				-0.7
52,045	+				+1.3
52,045	+				-3.5
52,045	+				+5.3
52,100	+		GFF4415	0.23	+2.0
52,100	+		GFF4415	0.23	+0.2
52,396	+				-0.5
52,396	+				-2.7
52,411	+				+0.2
52,411	+				+0.6
52,498	+		GFF4416	0.37	-3.2
52,591	-		GFF4416	0.71	-0.5
52,940	+		GFF4417	0.10	-2.1
52,941	-		GFF4417	0.10	-2.7