Strain Fitness in Variovorax sp. SCN45 around GFF2594

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
60	+				-2.2
76	+				-0.1
250	-		GFF2594	0.24	+0.1
343	-		GFF2594	0.33	-2.3
603	+		GFF2594	0.58	+1.6
603	+		GFF2594	0.58	-3.7
603	+		GFF2594	0.58	-1.4
603	+		GFF2594	0.58	+0.9
604	-		GFF2594	0.58	+0.3
613	+		GFF2594	0.59	+0.4
613	+		GFF2594	0.59	-2.9
613	+		GFF2594	0.59	-0.7
613	+		GFF2594	0.59	+0.3
613	+		GFF2594	0.59	-2.1
613	+		GFF2594	0.59	-3.0
613	+		GFF2594	0.59	-1.3
613	+		GFF2594	0.59	-1.4
613	+		GFF2594	0.59	-2.3
613	+		GFF2594	0.59	+0.9
614	-		GFF2594	0.59	-0.3
614	-		GFF2594	0.59	+2.7
614	-		GFF2594	0.59	+1.9
614	-		GFF2594	0.59	-1.4
614	-		GFF2594	0.59	-2.9
614	-		GFF2594	0.59	-0.3
614	-		GFF2594	0.59	-1.3
614	-		GFF2594	0.59	-1.3
614	-		GFF2594	0.59	+1.9
614	-		GFF2594	0.59	-0.7
614	-		GFF2594	0.59	+0.7
614	-		GFF2594	0.59	-1.7
858	+		GFF2594	0.83	-0.0
858	+		GFF2594	0.83	-1.5
859	-		GFF2594	0.83	-0.1
1,048	+				+1.4
1,048	+				-0.7
1,048	+				+2.7
1,075	+				-0.1
1,075	+				-1.3
1,088	-				-0.5
1,088	-				+2.2
1,139	-				-0.7
1,139	-				-3.1
1,144	+				+0.1
1,145	-				-1.5
1,411	+		GFF2595	0.32	+1.9
1,411	+		GFF2595	0.32	+2.1
1,411	+		GFF2595	0.32	-1.4
1,411	+		GFF2595	0.32	+1.0
1,411	+		GFF2595	0.32	-0.0
1,411	+		GFF2595	0.32	-1.9
1,411	+		GFF2595	0.32	+1.1
1,412	-		GFF2595	0.32	+1.5
1,412	-		GFF2595	0.32	-2.8
1,412	-		GFF2595	0.32	-1.9
1,412	-		GFF2595	0.32	+0.7
1,588	+		GFF2595	0.55	+0.2
1,588	+		GFF2595	0.55	-2.7
1,805	-		GFF2595	0.83	-3.9