Strain Fitness in Variovorax sp. SCN45 around GFF736

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
52	+				-1.0
52	+				+1.0
52	+				+1.7
52	+				-1.0
52	+				-2.0
52	+				-1.7
52	+				-0.9
52	+				+0.8
77	+				+0.2
106	+				+0.8
106	+				+0.7
107	-				+0.7
107	-				+0.3
129	+				-0.3
129	+				+0.3
129	+				-0.6
129	+				+2.0
129	+				-0.9
129	+				-2.0
129	+				+2.1
130	-				-0.3
130	-				+0.6
130	-				-0.3
130	-				-2.8
130	-				+0.0
130	-				-2.7
160	+		GFF736	0.13	-0.3
161	-		GFF736	0.14	-1.4
177	+		GFF736	0.24	-1.8
177	+		GFF736	0.24	-0.6
178	-		GFF736	0.25	-0.2
184	+		GFF736	0.28	-3.0
184	+		GFF736	0.28	-1.1
184	+		GFF736	0.28	-1.5
185	-		GFF736	0.29	-1.6
190	+		GFF736	0.32	-0.8
190	+		GFF736	0.32	-1.0
190	+		GFF736	0.32	-0.8
190	+		GFF736	0.32	+0.6
190	+		GFF736	0.32	+1.2
190	+		GFF736	0.32	-2.6
190	+		GFF736	0.32	+0.4
190	+		GFF736	0.32	+0.1
190	+		GFF736	0.32	-0.6
190	+		GFF736	0.32	-0.6
190	+		GFF736	0.32	-1.2
191	-		GFF736	0.33	+3.6
191	-		GFF736	0.33	-3.5
191	-		GFF736	0.33	+0.4
191	-		GFF736	0.33	-0.4
191	-		GFF736	0.33	-0.8
191	-		GFF736	0.33	-4.0
191	-		GFF736	0.33	-0.3
191	-		GFF736	0.33	-1.0
191	-		GFF736	0.33	-2.0
191	-		GFF736	0.33	+0.4
271	-		GFF736	0.83	-2.8
271	-		GFF736	0.83	+0.3
285	+				-2.8
285	+				-0.6
285	+				+0.2
285	+				+0.9
285	+				-2.7
285	+				-1.4
285	+				+1.1
285	+				+0.5
285	+				+0.7
285	+				-0.6
285	+				+1.9
286	-				-2.0
286	-				-2.3
286	-				+1.7
286	-				-1.6
286	-				-1.1
286	-				-0.3
286	-				+0.1
286	-				+0.2
286	-				-2.4
286	-				+1.7
286	-				-0.2
286	-				+0.2
286	-				-2.2
307	+				+0.5
307	+				+0.1
307	+				+0.8
308	-				-3.6
308	-				-0.0
308	-				-3.1
308	-				-2.1
308	-				+0.1
308	-				-1.1
352	+				-1.4
353	-				-0.7
605	+		GFF737	0.51	+0.2
605	+		GFF737	0.51	+0.7
605	+		GFF737	0.51	+0.7
605	+		GFF737	0.51	-2.1
605	+		GFF737	0.51	+0.3
605	+		GFF737	0.51	+0.7
605	+		GFF737	0.51	-1.7
605	+		GFF737	0.51	-2.3
605	+		GFF737	0.51	-2.7
605	+		GFF737	0.51	-1.9
605	+		GFF737	0.51	+1.3
605	+		GFF737	0.51	-0.8
605	+		GFF737	0.51	+0.2
605	+		GFF737	0.51	-0.8
606	-		GFF737	0.51	-1.1
606	-		GFF737	0.51	-2.3
606	-		GFF737	0.51	-1.3
606	-		GFF737	0.51	+0.2
606	-		GFF737	0.51	+0.1
606	-		GFF737	0.51	-0.1
606	-		GFF737	0.51	-1.6
606	-		GFF737	0.51	+1.3
795	+				-2.3
795	+				-2.6
795	+				-0.1
795	+				-0.9
795	+				-2.2
795	+				-1.4
795	+				+0.4
795	+				+2.7
795	+				-3.8
796	-				+1.7
796	-				-1.2
796	-				-1.6
796	-				-0.5
796	-				+0.2
796	-				+2.2
796	-				+0.0
796	-				+0.0
796	-				-1.4
796	-				+0.7
796	-				+3.1
855	+				-0.9
855	+				-0.8
856	-				+2.2
896	+		GFF738	0.21	+0.2
896	+		GFF738	0.21	-1.1
896	+		GFF738	0.21	-2.1
896	+		GFF738	0.21	+0.0
896	+		GFF738	0.21	+1.4
896	+		GFF738	0.21	-1.4
897	-		GFF738	0.22	-3.0
1,061	+				+0.5
1,061	+				-0.6
1,061	+				-0.2
1,061	+				+2.4
1,062	-				+1.7
1,062	-				-0.0
1,062	-				-1.7
1,062	-				+0.7