Strain Fitness in Variovorax sp. SCN45 around GFF7182

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
58	+				+0.5
74	+				-0.2
108	+				-1.0
109	-				+0.8
113	-				-0.2
194	+				-3.1
207	+				-0.9
256	+		GFF7182	0.20	-1.7
350	-		GFF7182	0.40	+0.1
416	+		GFF7182	0.55	-1.6
417	-		GFF7182	0.55	-1.4
420	+		GFF7182	0.55	-0.2
421	-		GFF7182	0.56	-2.5
421	-		GFF7182	0.56	-2.2
529	-		GFF7182	0.79	-1.4
529	-		GFF7182	0.79	-0.2
903	-				+0.7
911	+				+1.1
911	+				+1.1
940	-		GFF7183	0.12	+0.4
1,027	-		GFF7183	0.25	-0.2
1,036	-		GFF7183	0.26	+0.5
1,077	+		GFF7183	0.32	-0.6
1,078	-		GFF7183	0.32	-2.1
1,078	-		GFF7183	0.32	+0.2
1,086	+		GFF7183	0.34	-1.9
1,221	+		GFF7183	0.54	-1.6
1,524	-				-1.1
1,524	-				+0.9