Strain Fitness in Variovorax sp. SCN45 around GFF7103

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
20,353	+		GFF7102	0.32	+0.6
20,353	+		GFF7102	0.32	-0.7
20,354	-		GFF7102	0.32	+0.2
20,354	-		GFF7102	0.32	+0.3
20,354	-		GFF7102	0.32	+0.7
20,354	-		GFF7102	0.32	-3.0
20,476	+		GFF7102	0.40	+1.3
20,654	+		GFF7102	0.52	-1.1
20,953	+		GFF7102	0.73	+0.7
20,953	+		GFF7102	0.73	-3.6
20,954	-		GFF7102	0.73	+1.2
20,954	-		GFF7102	0.73	+1.4
20,954	-		GFF7102	0.73	-0.8
20,954	-		GFF7102	0.73	-0.1
20,977	+		GFF7102	0.75	-2.1
20,977	+		GFF7102	0.75	-1.3
21,016	+		GFF7102	0.77	-0.6
21,016	+		GFF7102	0.77	-0.3
21,017	-		GFF7102	0.77	+1.8
21,017	-		GFF7102	0.77	-0.7
21,066	+		GFF7102	0.81	+0.2
21,066	+		GFF7102	0.81	-0.9
21,066	+		GFF7102	0.81	-2.6
21,066	+		GFF7102	0.81	-0.2
21,066	+		GFF7102	0.81	-2.3
21,066	+		GFF7102	0.81	+1.3
21,067	-		GFF7102	0.81	-2.3
21,067	-		GFF7102	0.81	+1.7
21,067	-		GFF7102	0.81	-0.1
21,067	-		GFF7102	0.81	-0.3
21,292	+				-1.6
21,292	+				-0.2
21,293	-				-2.1
21,486	+		GFF7103	0.19	-0.6
21,487	-		GFF7103	0.19	-1.4
21,667	-		GFF7103	0.43	-0.5
21,681	+		GFF7103	0.45	+1.1
21,696	+		GFF7103	0.47	+2.5
21,697	-		GFF7103	0.47	-0.5
21,726	+		GFF7103	0.51	+0.5
21,726	+		GFF7103	0.51	+0.7
21,726	+		GFF7103	0.51	-1.8
21,726	+		GFF7103	0.51	+0.2
21,726	+		GFF7103	0.51	+0.3
21,727	-		GFF7103	0.51	-0.3
21,727	-		GFF7103	0.51	+1.1
21,727	-		GFF7103	0.51	-0.5
21,727	-		GFF7103	0.51	-1.3
21,727	-		GFF7103	0.51	+0.3
21,727	-		GFF7103	0.51	-1.7
21,727	-		GFF7103	0.51	-0.5
21,727	-		GFF7103	0.51	-2.0
21,727	-		GFF7103	0.51	+1.4
21,732	+		GFF7103	0.51	+0.1
21,732	+		GFF7103	0.51	-1.8
21,732	+		GFF7103	0.51	-0.1
21,732	+		GFF7103	0.51	-0.6
21,732	+		GFF7103	0.51	+0.6
21,732	+		GFF7103	0.51	-0.7
21,733	-		GFF7103	0.51	-2.9
21,733	-		GFF7103	0.51	+1.7
21,733	-		GFF7103	0.51	+1.1
21,733	-		GFF7103	0.51	-0.0
21,733	-		GFF7103	0.51	+2.2
21,795	+		GFF7103	0.60	-0.3
21,796	-		GFF7103	0.60	-0.4
21,796	-		GFF7103	0.60	-0.3
21,796	-		GFF7103	0.60	+0.1
21,804	+		GFF7103	0.61	-0.4
21,804	+		GFF7103	0.61	-0.4
21,804	+		GFF7103	0.61	-0.1
21,804	+		GFF7103	0.61	-0.6
21,804	+		GFF7103	0.61	+0.8
21,804	+		GFF7103	0.61	-0.3
21,804	+		GFF7103	0.61	-0.9
21,804	+		GFF7103	0.61	+1.0
21,804	+		GFF7103	0.61	-2.3
21,804	+		GFF7103	0.61	-0.9
21,804	+		GFF7103	0.61	+1.4
21,804	+		GFF7103	0.61	+0.1
21,804	+		GFF7103	0.61	-2.3
21,804	+		GFF7103	0.61	+0.4
21,805	-		GFF7103	0.61	-1.6
21,805	-		GFF7103	0.61	-1.2
21,805	-		GFF7103	0.61	-3.2
21,805	-		GFF7103	0.61	+0.2
21,805	-		GFF7103	0.61	+2.0
21,805	-		GFF7103	0.61	+0.3
21,805	-		GFF7103	0.61	-0.1
21,805	-		GFF7103	0.61	+0.7
21,805	-		GFF7103	0.61	-0.2
21,805	-		GFF7103	0.61	-1.1
21,805	-		GFF7103	0.61	-0.4
21,805	-		GFF7103	0.61	+2.2
21,924	+		GFF7103	0.77	-0.1
21,924	+		GFF7103	0.77	-1.8
21,925	-		GFF7103	0.77	+2.2
21,925	-		GFF7103	0.77	-1.4
21,925	-		GFF7103	0.77	+0.2
21,925	-		GFF7103	0.77	-0.6
21,925	-		GFF7103	0.77	-2.3
21,925	-		GFF7103	0.77	-1.7
22,203	+		GFF7104	0.17	-1.0
22,334	-		GFF7104	0.37	-1.6
22,439	+		GFF7104	0.53	-1.2
22,440	-		GFF7104	0.53	-1.7
22,481	+		GFF7104	0.60	-2.4
22,481	+		GFF7104	0.60	+0.4
22,481	+		GFF7104	0.60	+1.1
22,481	+		GFF7104	0.60	+1.2
22,481	+		GFF7104	0.60	-0.5
22,481	+		GFF7104	0.60	-2.1
22,482	-		GFF7104	0.60	-0.5
22,482	-		GFF7104	0.60	-1.7
22,482	-		GFF7104	0.60	+1.2
22,482	-		GFF7104	0.60	+1.0
22,482	-		GFF7104	0.60	+0.8
22,482	-		GFF7104	0.60	-0.1
22,482	-		GFF7104	0.60	-1.3
22,607	+		GFF7104	0.79	-0.8
22,607	+		GFF7104	0.79	+1.7
22,607	+		GFF7104	0.79	-1.5
22,607	+		GFF7104	0.79	-2.7
22,607	+		GFF7104	0.79	-1.2
22,607	+		GFF7104	0.79	-3.4
22,608	-		GFF7104	0.79	+1.9
22,608	-		GFF7104	0.79	-2.7
22,608	-		GFF7104	0.79	+2.2
22,608	-		GFF7104	0.79	+0.1
22,637	+		GFF7104	0.84	+0.6
22,637	+		GFF7104	0.84	-2.9
22,637	+		GFF7104	0.84	-1.8
22,637	+		GFF7104	0.84	-0.8
22,638	-		GFF7104	0.84	-3.0
22,638	-		GFF7104	0.84	+1.1
22,703	+				+0.6
22,703	+				-0.8
22,703	+				-1.8
22,703	+				-0.1
22,703	+				+1.2
22,704	-				+0.7
22,704	-				-0.9
22,704	-				-0.9
22,704	-				-3.5
22,704	-				+1.9
22,704	-				+2.5
22,705	+				-0.6
22,705	+				+1.1
22,705	+				-0.4
22,705	+				-1.6
22,705	+				+1.7
22,705	+				-1.0
22,705	+				-2.5
22,705	+				+0.5
22,705	+				-0.9
22,705	+				-0.9
22,705	+				-0.1
22,705	+				-2.2
22,705	+				+0.2
22,705	+				-1.6
22,705	+				-2.2
22,705	+				-0.2
22,705	+				-2.1
22,705	+				-3.3
22,705	+				-0.8
22,705	+				+0.7
22,705	+				+1.4
22,705	+				-1.4
22,705	+				-0.6
22,705	+				-0.8
22,705	+				+1.1
22,705	+				-1.9
22,705	+				-0.1
22,706	-				-1.8
22,706	-				-2.2
22,706	-				+0.7
22,706	-				+0.3
22,706	-				-2.1
22,706	-				-0.9
22,706	-				-0.9
22,706	-				-0.7
22,706	-				+0.1
22,706	-				+1.4
22,706	-				-1.3
22,706	-				-1.3
22,706	-				+1.3
22,706	-				+0.2
22,706	-				+2.2
22,706	-				+0.0
22,706	-				-0.6
22,706	-				-0.3
22,706	-				-1.6
22,706	-				-1.5
22,707	-				+1.9
22,766	+				-2.7
22,780	+				-1.8
22,780	+				-2.6
22,780	+				+1.8
22,780	+				+0.9
22,780	+				-0.8
22,780	+				+0.1
22,780	+				+0.4
22,780	+				-0.2
22,780	+				-1.5
22,780	+				+1.3
22,780	+				-1.3
22,780	+				-2.2
22,781	-				-2.1
22,781	-				+2.7
22,781	-				-0.1
22,781	-				+0.5
22,781	-				-0.2
22,781	-				-1.3
22,781	-				-1.2
22,781	-				-0.7
22,781	-				+0.2
22,781	-				-0.1
22,781	-				+0.3
22,781	-				-3.3
22,828	+		GFF7105	0.20	-2.5
22,828	+		GFF7105	0.20	-0.9