Strain Fitness in Variovorax sp. SCN45 around GFF71

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
87,459	+		GFF70	0.38	+0.5
87,991	-		GFF70	0.73	+0.7
88,167	+		GFF70	0.84	+0.8
88,168	-		GFF70	0.84	-1.1
88,168	-		GFF70	0.84	+1.1
88,287	+				+0.6
88,287	+				+2.6
88,288	-				+0.1
88,288	-				+0.8
88,288	-				-1.8
88,446	+				-2.4
88,526	-		GFF71	0.14	+0.9
88,526	-		GFF71	0.14	+1.7
88,795	+		GFF71	0.48	-0.5
88,795	+		GFF71	0.48	-1.3
88,796	-		GFF71	0.48	+1.8
89,232	+				+1.0
89,449	+		GFF72	0.18	+0.1
89,449	+		GFF72	0.18	+0.1
89,449	+		GFF72	0.18	-0.1
89,449	+		GFF72	0.18	-0.3
89,449	+		GFF72	0.18	+1.2
89,449	+		GFF72	0.18	-1.2
89,450	-		GFF72	0.18	-0.9
89,450	-		GFF72	0.18	+0.5
89,450	-		GFF72	0.18	+1.9
89,671	+		GFF72	0.38	-1.0
89,671	+		GFF72	0.38	-0.5
89,671	+		GFF72	0.38	-1.5
89,671	+		GFF72	0.38	-3.5
89,671	+		GFF72	0.38	-0.1
89,672	-		GFF72	0.38	-0.6
89,672	-		GFF72	0.38	+3.5
89,672	-		GFF72	0.38	+1.8
90,134	-		GFF72	0.78	+1.5