Strain Fitness in Variovorax sp. SCN45 around GFF6778

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
23,920	+		GFF6777	0.23	+1.0
23,920	+		GFF6777	0.23	-1.3
23,920	+		GFF6777	0.23	+1.7
23,921	-		GFF6777	0.23	-1.1
24,235	+		GFF6777	0.53	+0.3
24,236	-		GFF6777	0.53	-2.6
24,236	-		GFF6777	0.53	-1.0
24,236	-		GFF6777	0.53	-0.6
24,334	+		GFF6777	0.62	+1.0
24,334	+		GFF6777	0.62	-1.3
24,334	+		GFF6777	0.62	+0.2
24,335	-		GFF6777	0.62	+2.2
24,503	-		GFF6777	0.78	-0.4
24,844	-				-1.6
24,993	+		GFF6778	0.22	-0.6
24,994	-		GFF6778	0.22	-0.5
25,032	+		GFF6778	0.25	+0.2
25,033	-		GFF6778	0.25	+0.6
25,033	-		GFF6778	0.25	-1.4
25,554	+		GFF6778	0.73	-2.6
25,692	+		GFF6778	0.85	-0.3
25,693	-		GFF6778	0.85	-1.1
25,693	-		GFF6778	0.85	+0.2
25,710	+		GFF6778	0.87	+0.1
25,710	+		GFF6778	0.87	-0.5
25,710	+		GFF6778	0.87	-0.7
25,710	+		GFF6778	0.87	+1.7
25,711	-		GFF6778	0.87	-3.1
25,714	-		GFF6778	0.87	-1.4
25,773	+				+0.3
25,773	+				+0.1
25,773	+				+1.7
25,773	+				-0.2
25,774	-				-1.3
25,774	-				-3.0
25,788	+				+0.2
25,788	+				+1.1
25,788	+				-1.4
25,788	+				-0.5
25,788	+				+0.6
25,788	+				+0.5
25,788	+				-1.1
25,788	+				+0.8
25,788	+				+0.4
25,788	+				-0.0
25,788	+				+0.0
25,788	+				+0.4
25,788	+				-2.0
25,789	-				-1.2
25,789	-				+1.7
25,789	-				+0.7
25,789	-				+1.4
25,789	-				+1.3
25,789	-				-2.6
25,789	-				+1.0
25,789	-				+0.3
25,789	-				+0.1
25,789	-				+0.4
25,885	+				+1.2
25,885	+				-2.0
25,885	+				-3.9
25,885	+				-2.1
25,885	+				-2.3
25,885	+				-0.6
25,885	+				-0.6
25,885	+				-0.5
25,885	+				-1.9
25,885	+				+0.9
25,885	+				-1.3
25,885	+				-2.1
25,885	+				-1.0
25,885	+				+1.3
25,885	+				-1.2
25,885	+				-1.0
25,885	+				-0.5
25,885	+				-1.0
25,885	+				-1.6
25,885	+				+0.3
25,885	+				-3.0
25,885	+				+0.7
25,885	+				+2.9
25,885	+				-3.9
25,886	-				+1.0
25,886	-				-0.7
25,886	-				-0.8
25,886	-				-2.1
25,886	-				+0.2
25,886	-				-1.3
25,886	-				-2.5
25,886	-				-2.6
25,886	-				+0.1
25,886	-				-1.2
25,886	-				-1.5
25,886	-				-0.6
25,886	-				-2.4
25,886	-				-1.9
25,886	-				+0.7
25,886	-				-0.6
26,727	+		GFF6779	0.45	-2.9
26,727	+		GFF6779	0.45	+0.1
26,727	+		GFF6779	0.45	-1.3
26,727	+		GFF6779	0.45	+0.1
26,727	+		GFF6779	0.45	-1.9
26,727	+		GFF6779	0.45	-1.3
26,728	-		GFF6779	0.45	-2.3
26,728	-		GFF6779	0.45	-1.3
26,728	-		GFF6779	0.45	+1.2
26,728	-		GFF6779	0.45	+0.8
26,754	+		GFF6779	0.47	+0.0