Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6724 and GFF6725 are separated by 37 nucleotides GFF6725 and GFF6726 overlap by 4 nucleotides
GFF6724 - hypothetical protein, at 33,896 to 35,020
GFF6724
GFF6725 - Tellurite resistance protein, at 35,058 to 36,308
GFF6725
GFF6726 - hypothetical protein, at 36,305 to 37,909
GFF6726
Position (kb) 35
36
37 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 34.268 kb on + strand, within GFF6724 at 34.268 kb on + strand, within GFF6724 at 34.352 kb on + strand, within GFF6724 at 34.355 kb on + strand, within GFF6724 at 34.355 kb on + strand, within GFF6724 at 34.355 kb on + strand, within GFF6724 at 34.355 kb on + strand, within GFF6724 at 34.356 kb on - strand, within GFF6724 at 34.356 kb on - strand, within GFF6724 at 34.500 kb on - strand, within GFF6724 at 34.500 kb on - strand, within GFF6724 at 34.517 kb on + strand, within GFF6724 at 34.518 kb on - strand, within GFF6724 at 34.644 kb on - strand, within GFF6724 at 34.686 kb on - strand, within GFF6724 at 34.686 kb on - strand, within GFF6724 at 34.755 kb on - strand, within GFF6724 at 35.685 kb on + strand, within GFF6725 at 35.685 kb on + strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.793 kb on + strand, within GFF6725 at 36.133 kb on + strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.237 kb on + strand at 36.238 kb on - strand at 36.238 kb on - strand at 36.768 kb on - strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.987 kb on - strand, within GFF6726 at 37.118 kb on + strand, within GFF6726 at 37.119 kb on - strand, within GFF6726 at 37.284 kb on + strand, within GFF6726 at 37.295 kb on + strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 34,268 + GFF6724 0.33 -1.9 34,268 + GFF6724 0.33 +0.1 34,352 + GFF6724 0.41 -0.8 34,355 + GFF6724 0.41 -1.6 34,355 + GFF6724 0.41 -2.8 34,355 + GFF6724 0.41 -0.0 34,355 + GFF6724 0.41 +0.5 34,356 - GFF6724 0.41 -0.6 34,356 - GFF6724 0.41 +0.8 34,500 - GFF6724 0.54 -1.1 34,500 - GFF6724 0.54 -1.4 34,517 + GFF6724 0.55 -1.4 34,518 - GFF6724 0.55 -0.6 34,644 - GFF6724 0.66 +0.9 34,686 - GFF6724 0.70 +0.2 34,686 - GFF6724 0.70 +0.9 34,755 - GFF6724 0.76 +0.2 35,685 + GFF6725 0.50 -0.5 35,685 + GFF6725 0.50 +1.9 35,686 - GFF6725 0.50 +2.0 35,686 - GFF6725 0.50 +1.6 35,793 + GFF6725 0.59 -2.9 36,133 + GFF6725 0.86 +0.2 36,136 - GFF6725 0.86 +1.2 36,136 - GFF6725 0.86 -2.1 36,237 + -0.6 36,238 - +0.3 36,238 - -0.9 36,768 - GFF6726 0.29 -3.3 36,986 + GFF6726 0.42 -0.2 36,986 + GFF6726 0.42 -1.3 36,987 - GFF6726 0.42 +1.2 37,118 + GFF6726 0.51 +1.8 37,119 - GFF6726 0.51 +0.9 37,284 + GFF6726 0.61 -3.6 37,295 + GFF6726 0.62 -2.2 37,296 - GFF6726 0.62 +1.2 37,296 - GFF6726 0.62 +1.0 37,296 - GFF6726 0.62 +2.4
Or see this region's nucleotide sequence