Strain Fitness in Variovorax sp. SCN45 around GFF6574

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
14,209	+				-0.4
14,210	-				-2.3
14,210	-				+0.4
14,210	-				+1.8
14,282	+				-1.1
14,282	+				-3.4
14,282	+				-0.5
14,282	+				-3.4
14,282	+				-2.1
14,282	+				+2.3
14,282	+				-3.5
14,282	+				+0.0
14,283	-				-0.3
14,283	-				-0.9
14,283	-				-2.8
14,550	-		GFF6573	0.46	-2.1
14,550	-		GFF6573	0.46	+0.6
14,631	-		GFF6573	0.58	+0.5
14,631	-		GFF6573	0.58	-4.4
14,718	-		GFF6573	0.70	-2.2
14,718	-		GFF6573	0.70	+1.9
14,718	-		GFF6573	0.70	-2.6
14,718	-		GFF6573	0.70	-0.6
16,040	+		GFF6574	0.83	+1.1
16,040	+		GFF6574	0.83	+2.2
16,040	+		GFF6574	0.83	+0.1
16,041	-		GFF6574	0.83	+0.7
16,058	+		GFF6574	0.84	-1.4
16,058	+		GFF6574	0.84	-2.3
16,058	+		GFF6574	0.84	-0.1
16,059	-		GFF6574	0.84	-1.8
16,059	-		GFF6574	0.84	-2.2
16,059	-		GFF6574	0.84	-3.4
16,146	+				-0.4
16,147	-				+0.4
16,147	-				-2.5
16,147	-				+0.1
16,147	-				+0.1
16,147	-				-1.8
16,147	-				-1.9
16,217	+				-1.1
16,218	-				-0.7
16,218	-				+1.2
16,290	-				-0.9
16,313	+				+0.5
16,313	+				-3.6
16,313	+				+0.5
16,314	-				+0.1
16,314	-				-2.8
16,314	-				+0.6
16,668	-		GFF6575	0.50	+1.8
16,668	-		GFF6575	0.50	-1.6
16,668	-		GFF6575	0.50	+0.7
16,679	+		GFF6575	0.52	+0.1
16,680	-		GFF6575	0.52	-1.9
16,718	+		GFF6575	0.57	+0.8
16,849	+		GFF6575	0.74	+0.1
16,849	+		GFF6575	0.74	-1.8
16,850	-		GFF6575	0.74	-1.5
16,850	-		GFF6575	0.74	-0.3