Strain Fitness in Variovorax sp. SCN45 around GFF6212

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
118,564	+				-3.4
118,564	+				-3.2
118,564	+				+1.0
118,564	+				-0.5
118,565	-				-1.3
118,565	-				-4.5
118,565	-				-1.5
118,565	-				+1.8
118,565	-				+0.2
118,581	+				+0.2
118,581	+				-2.6
118,581	+				+0.7
118,581	+				-3.6
118,582	-				-0.7
118,582	-				+2.3
118,582	-				+0.0
118,602	+				-2.0
118,602	+				-2.6
118,602	+				-2.5
118,602	+				-2.9
118,603	-				-1.0
118,603	-				-1.8
118,603	-				+1.1
118,603	-				+1.3
118,603	-				-0.9
118,603	-				-2.0
118,641	+		GFF6211	0.12	-3.9
118,784	+		GFF6211	0.30	-0.1
118,784	+		GFF6211	0.30	+3.0
118,785	-		GFF6211	0.30	-1.3
118,785	-		GFF6211	0.30	-2.4
118,785	-		GFF6211	0.30	-0.2
118,785	-		GFF6211	0.30	-2.0
118,785	-		GFF6211	0.30	+1.0
118,878	+		GFF6211	0.42	+0.3
118,878	+		GFF6211	0.42	-0.2
118,878	+		GFF6211	0.42	-0.2
118,879	-		GFF6211	0.43	-0.4
118,879	-		GFF6211	0.43	+1.8
118,879	-		GFF6211	0.43	-2.3
118,879	-		GFF6211	0.43	-2.0
118,879	-		GFF6211	0.43	-1.6
118,975	-		GFF6211	0.55	-3.0
118,975	-		GFF6211	0.55	-0.7
118,975	-		GFF6211	0.55	-2.0
119,178	+		GFF6211	0.82	-0.7
119,178	+		GFF6211	0.82	-0.9
119,178	+		GFF6211	0.82	-0.2
119,178	+		GFF6211	0.82	+0.4
119,178	+		GFF6211	0.82	-4.0
119,178	+		GFF6211	0.82	-3.6
119,179	-		GFF6211	0.82	-0.3
119,179	-		GFF6211	0.82	+1.1
119,267	+				-0.1
119,267	+				-0.7
119,267	+				+0.9
119,267	+				-0.5
119,267	+				-1.5
119,268	-				-0.9
119,268	-				-2.0
119,268	-				+0.2
119,268	-				-0.5
119,268	-				-1.8
119,268	-				+0.4
119,268	-				+2.5
119,268	-				+1.3
119,268	-				+0.7
119,268	-				-2.3
119,526	-				+0.7
119,661	+		GFF6212	0.41	+3.7
119,661	+		GFF6212	0.41	-0.5
119,661	+		GFF6212	0.41	+1.8
119,661	+		GFF6212	0.41	-0.3
119,661	+		GFF6212	0.41	+1.4
119,661	+		GFF6212	0.41	-1.4
119,661	+		GFF6212	0.41	-0.3
119,662	-		GFF6212	0.41	-1.5
119,662	-		GFF6212	0.41	-0.5
119,662	-		GFF6212	0.41	-1.7
119,722	-		GFF6212	0.56	-0.7
119,762	-		GFF6212	0.65	+2.1
119,762	-		GFF6212	0.65	+0.1
119,913	+				-0.7
119,947	+				+0.7
119,948	-				-4.2
120,063	+				+1.1
120,245	+		GFF6213	0.19	-0.7
120,245	+		GFF6213	0.19	-3.1
120,245	+		GFF6213	0.19	-0.1
120,245	+		GFF6213	0.19	+0.4
120,245	+		GFF6213	0.19	-0.3
120,245	+		GFF6213	0.19	-0.9
120,245	+		GFF6213	0.19	+1.3
120,245	+		GFF6213	0.19	-2.1
120,245	+		GFF6213	0.19	-1.6
120,245	+		GFF6213	0.19	-0.9
120,245	+		GFF6213	0.19	-0.2
120,245	+		GFF6213	0.19	-2.2
120,245	+		GFF6213	0.19	-1.0
120,245	+		GFF6213	0.19	-2.6
120,245	+		GFF6213	0.19	-1.2
120,245	+		GFF6213	0.19	+2.2
120,245	+		GFF6213	0.19	+1.8
120,246	-		GFF6213	0.19	-3.4
120,246	-		GFF6213	0.19	-0.1
120,246	-		GFF6213	0.19	-1.0
120,246	-		GFF6213	0.19	-1.6
120,246	-		GFF6213	0.19	-3.8
120,246	-		GFF6213	0.19	-0.5
120,246	-		GFF6213	0.19	-3.8
120,246	-		GFF6213	0.19	-1.6
120,246	-		GFF6213	0.19	-1.3
120,246	-		GFF6213	0.19	-1.4
120,246	-		GFF6213	0.19	-2.2
120,246	-		GFF6213	0.19	-2.8
120,246	-		GFF6213	0.19	-0.4
120,246	-		GFF6213	0.19	-1.3
120,246	-		GFF6213	0.19	-2.6
120,246	-		GFF6213	0.19	-1.7
120,257	+		GFF6213	0.20	+0.3
120,257	+		GFF6213	0.20	-0.2
120,257	+		GFF6213	0.20	+0.3
120,258	-		GFF6213	0.20	-2.7
120,296	+		GFF6213	0.23	+2.1
120,296	+		GFF6213	0.23	-0.9
120,296	+		GFF6213	0.23	+0.3
120,296	+		GFF6213	0.23	-1.5
120,297	-		GFF6213	0.24	-3.2
120,297	-		GFF6213	0.24	-4.5
120,298	+		GFF6213	0.24	-2.2
120,298	+		GFF6213	0.24	-1.0
120,298	+		GFF6213	0.24	-0.5
120,299	-		GFF6213	0.24	-3.8
120,299	-		GFF6213	0.24	-2.9
120,299	-		GFF6213	0.24	-0.7
120,578	+		GFF6213	0.50	+1.2
120,578	+		GFF6213	0.50	-2.2
120,579	-		GFF6213	0.50	-0.7
120,579	-		GFF6213	0.50	-3.2
120,579	-		GFF6213	0.50	-0.7
120,579	-		GFF6213	0.50	-3.5
120,668	+		GFF6213	0.59	-1.2
120,669	-		GFF6213	0.59	-2.1
120,669	-		GFF6213	0.59	-0.8
120,794	+		GFF6213	0.71	-1.2
120,794	+		GFF6213	0.71	-0.4
120,795	-		GFF6213	0.71	-1.5
120,795	-		GFF6213	0.71	-0.5
120,795	-		GFF6213	0.71	-0.5
120,870	+		GFF6213	0.78	-3.5
120,870	+		GFF6213	0.78	-0.6
120,870	+		GFF6213	0.78	-0.5
120,871	-		GFF6213	0.78	+0.5
120,871	-		GFF6213	0.78	-0.2
120,871	-		GFF6213	0.78	-2.8