Strain Fitness in Variovorax sp. SCN45 around GFF6207

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
113,840	-				-2.4
113,955	+		GFF6206	0.25	-3.1
114,142	-		GFF6206	0.49	+1.3
114,337	-		GFF6206	0.75	+0.3
114,545	+				+0.3
114,545	+				-0.2
114,890	+		GFF6207	0.47	+2.1
114,891	-		GFF6207	0.47	-2.2
114,891	-		GFF6207	0.47	+0.1
115,344	+				-0.7
115,383	+				-2.3
115,383	+				-2.3
115,383	+				+1.0
115,384	-				-2.3
115,384	-				+1.3
115,384	-				-0.7
115,384	-				-2.7
115,473	+		GFF6208	0.11	-0.7
115,491	+		GFF6208	0.12	+0.4
115,492	-		GFF6208	0.12	-0.7
115,492	-		GFF6208	0.12	-1.5
115,515	+		GFF6208	0.14	+0.2
115,515	+		GFF6208	0.14	-2.7
115,515	+		GFF6208	0.14	-1.7
115,516	-		GFF6208	0.14	-1.1
115,554	+		GFF6208	0.16	+0.7
115,557	+		GFF6208	0.16	-2.3
115,557	+		GFF6208	0.16	+0.7
115,558	-		GFF6208	0.16	-1.9
115,558	-		GFF6208	0.16	+0.3
115,641	+		GFF6208	0.22	-1.8
115,641	+		GFF6208	0.22	+0.3
116,025	+		GFF6208	0.48	-1.7
116,025	+		GFF6208	0.48	-0.5
116,025	+		GFF6208	0.48	-2.3
116,025	+		GFF6208	0.48	+0.8
116,026	-		GFF6208	0.48	+0.3
116,026	-		GFF6208	0.48	-0.7
116,166	+		GFF6208	0.57	-2.4
116,166	+		GFF6208	0.57	-1.5