Strain Fitness in Variovorax sp. SCN45 around GFF485

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
523,455	+				+0.0
523,455	+				-0.3
523,455	+				+1.5
523,456	-				-0.2
523,456	-				-2.0
523,456	-				+0.1
523,456	-				+0.5
523,607	+				-0.3
524,791	+		GFF485	0.48	+1.1
524,791	+		GFF485	0.48	+0.3
524,791	+		GFF485	0.48	+0.1
524,791	+		GFF485	0.48	+0.5
524,791	+		GFF485	0.48	+1.5
524,792	-		GFF485	0.48	+0.3
524,792	-		GFF485	0.48	+1.5
524,792	-		GFF485	0.48	-1.3
524,792	-		GFF485	0.48	-2.0
524,792	-		GFF485	0.48	-0.0
524,792	-		GFF485	0.48	+1.1
524,890	+		GFF485	0.60	+0.6
524,890	+		GFF485	0.60	-0.8
524,890	+		GFF485	0.60	-1.5
524,890	+		GFF485	0.60	-1.0
524,890	+		GFF485	0.60	+1.3
524,890	+		GFF485	0.60	-1.0
524,890	+		GFF485	0.60	-1.2
524,890	+		GFF485	0.60	-1.3
524,890	+		GFF485	0.60	+1.5
524,890	+		GFF485	0.60	+1.2
524,891	-		GFF485	0.60	-0.1
524,891	-		GFF485	0.60	+2.0
524,891	-		GFF485	0.60	+1.7
524,891	-		GFF485	0.60	-2.5
524,891	-		GFF485	0.60	-4.1
525,148	+				+1.3
525,148	+				-1.2
525,148	+				-0.2
525,148	+				+1.5
525,148	+				-0.2
525,149	-				-1.3
525,149	-				-1.4
525,149	-				+0.8
525,149	-				+1.5
525,431	+		GFF486	0.31	-2.1
525,431	+		GFF486	0.31	-3.3
525,432	-		GFF486	0.31	-0.7
525,432	-		GFF486	0.31	-0.2
525,432	-		GFF486	0.31	-3.3
525,564	+		GFF486	0.52	-2.0
525,564	+		GFF486	0.52	+0.5
525,564	+		GFF486	0.52	+0.2
525,565	-		GFF486	0.52	-0.7
525,723	+		GFF486	0.76	-2.0
525,723	+		GFF486	0.76	-1.5
525,723	+		GFF486	0.76	-0.1
525,723	+		GFF486	0.76	+0.9
525,723	+		GFF486	0.76	+1.7
525,723	+		GFF486	0.76	-2.2
525,723	+		GFF486	0.76	+0.5
525,724	-		GFF486	0.76	-1.2
525,724	-		GFF486	0.76	-1.3
525,724	-		GFF486	0.76	-2.4
525,724	-		GFF486	0.76	-1.3
525,724	-		GFF486	0.76	+0.9
525,724	-		GFF486	0.76	-0.5
525,724	-		GFF486	0.76	-1.1
525,724	-		GFF486	0.76	-0.3
525,765	+		GFF486	0.83	-3.8
525,766	-		GFF486	0.83	-2.6
525,766	-		GFF486	0.83	-1.3
525,766	-		GFF486	0.83	-0.5
525,766	-		GFF486	0.83	-3.7
525,864	+				-0.7
525,864	+				-1.1
525,864	+				+0.6
525,864	+				-1.3
525,864	+				-1.1
525,864	+				-1.8
525,864	+				-0.6
525,864	+				-2.4
525,865	-				-1.7
525,865	-				-0.1
525,865	-				-2.0
525,865	-				-3.7
525,889	+				-2.8
525,889	+				-1.1
525,889	+				-0.8
525,889	+				-1.7
525,889	+				-1.3
525,890	-				+0.7
525,890	-				+1.9
525,890	-				-0.3
525,890	-				+1.7
525,890	-				-0.5
525,890	-				-1.7
526,008	-				-0.8
526,116	-				-0.5