Strain Fitness in Variovorax sp. SCN45 around GFF3325

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
151,106	-		GFF3324	0.37	-2.2
151,430	+		GFF3324	0.61	-1.7
151,430	+		GFF3324	0.61	-0.3
151,430	+		GFF3324	0.61	+0.2
151,431	-		GFF3324	0.61	+2.4
151,431	-		GFF3324	0.61	-1.2
151,431	-		GFF3324	0.61	+0.2
151,431	-		GFF3324	0.61	+0.7
151,431	-		GFF3324	0.61	-0.1
151,657	+		GFF3324	0.77	+0.7
151,658	-		GFF3324	0.77	-2.5
151,658	-		GFF3324	0.77	+0.4
151,658	-		GFF3324	0.77	+1.1
151,717	+		GFF3324	0.81	-1.5
151,732	-		GFF3324	0.82	-0.0
152,122	+		GFF3325	0.16	-1.7
152,123	-		GFF3325	0.17	+1.0
152,232	+		GFF3325	0.31	-1.9
152,233	-		GFF3325	0.31	+1.2
152,377	+		GFF3325	0.50	+0.6
152,378	-		GFF3325	0.50	-0.9
152,378	-		GFF3325	0.50	-1.7
152,378	-		GFF3325	0.50	-1.3
152,434	+		GFF3325	0.58	+0.7
152,434	+		GFF3325	0.58	-0.0
152,434	+		GFF3325	0.58	+0.6
152,435	-		GFF3325	0.58	-0.7
152,686	+				-0.0
152,687	-				+2.1
152,687	-				+0.9
152,708	-				+2.7
152,820	+		GFF3326	0.13	+0.5
152,820	+		GFF3326	0.13	-1.6
152,820	+		GFF3326	0.13	-1.3
152,821	-		GFF3326	0.13	-3.7
152,821	-		GFF3326	0.13	-1.2
152,886	+		GFF3326	0.27	+0.3
152,887	-		GFF3326	0.27	-3.5
152,887	-		GFF3326	0.27	-0.1
152,887	-		GFF3326	0.27	+0.0
153,135	+		GFF3326	0.81	+0.1
153,136	-		GFF3326	0.81	-0.2
153,153	-		GFF3326	0.85	+0.8
153,497	+		GFF3327	0.57	-0.3
153,497	+		GFF3327	0.57	+1.0
153,498	-		GFF3327	0.57	-0.7
153,498	-		GFF3327	0.57	+1.3