Strain Fitness in Variovorax sp. SCN45 around GFF1516

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
110,652	+		GFF1515	0.38	-2.6
110,652	+		GFF1515	0.38	-1.4
110,796	+		GFF1515	0.48	-0.0
110,796	+		GFF1515	0.48	-0.7
110,796	+		GFF1515	0.48	-2.1
110,797	-		GFF1515	0.48	+0.2
110,797	-		GFF1515	0.48	-1.3
110,797	-		GFF1515	0.48	-1.7
110,797	-		GFF1515	0.48	+0.4
110,797	-		GFF1515	0.48	-0.2
111,081	+		GFF1515	0.68	-1.3
111,081	+		GFF1515	0.68	-1.2
111,225	+		GFF1515	0.78	+0.2
111,226	-		GFF1515	0.78	-1.0
111,226	-		GFF1515	0.78	+0.0
111,226	-		GFF1515	0.78	+2.0
111,226	-		GFF1515	0.78	+0.0
111,226	-		GFF1515	0.78	+1.3
111,758	-		GFF1516	0.17	-1.9
112,030	+		GFF1516	0.38	-0.1
112,030	+		GFF1516	0.38	-0.4
112,031	-		GFF1516	0.38	+0.2
112,031	-		GFF1516	0.38	-1.0
112,329	+		GFF1516	0.61	-0.0
112,329	+		GFF1516	0.61	+0.8
112,329	+		GFF1516	0.61	+2.3
112,329	+		GFF1516	0.61	+1.2
112,329	+		GFF1516	0.61	-1.6
112,329	+		GFF1516	0.61	+0.0
112,330	-		GFF1516	0.61	-0.0
112,351	-		GFF1516	0.63	+2.2
112,540	+		GFF1516	0.78	+0.1
112,540	+		GFF1516	0.78	+0.0
112,540	+		GFF1516	0.78	-2.8
112,998	+		GFF1517	0.32	+0.2
112,999	-		GFF1517	0.32	+0.1
113,094	+		GFF1517	0.49	+0.3
113,094	+		GFF1517	0.49	+0.2
113,094	+		GFF1517	0.49	-0.9
113,280	+		GFF1517	0.82	-1.5
113,486	+		GFF1518	0.12	-0.1
113,487	-		GFF1518	0.12	-2.0
113,814	-		GFF1518	0.81	-1.0
113,814	-		GFF1518	0.81	-1.4
113,817	+		GFF1518	0.82	+0.5
113,817	+		GFF1518	0.82	+2.6
113,817	+		GFF1518	0.82	+0.0
113,818	-		GFF1518	0.82	-1.9
113,818	-		GFF1518	0.82	+0.8
113,818	-		GFF1518	0.82	-0.7
113,818	-		GFF1518	0.82	-1.9
113,818	-		GFF1518	0.82	+0.5
113,818	-		GFF1518	0.82	-0.3
113,818	-		GFF1518	0.82	-1.5