Strain Fitness in Variovorax sp. SCN45 around GFF125

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
153,067	+		GFF124	0.33	+1.3
153,067	+		GFF124	0.33	-1.1
153,067	+		GFF124	0.33	-2.3
153,068	-		GFF124	0.33	-2.2
153,068	-		GFF124	0.33	-2.2
153,068	-		GFF124	0.33	+0.1
153,068	-		GFF124	0.33	-0.8
153,233	-		GFF124	0.46	-0.5
153,233	-		GFF124	0.46	-1.3
153,590	-		GFF124	0.73	-1.8
154,108	-		GFF125	0.17	-0.1
154,596	+		GFF125	0.64	+0.5
154,596	+		GFF125	0.64	-1.8
154,596	+		GFF125	0.64	-1.1
154,770	+		GFF125	0.80	-1.1
154,771	-		GFF125	0.80	-2.9
154,975	+				-2.9
154,976	-				-1.0
154,977	+				-3.2
154,978	-				-2.8
154,978	-				+1.5
154,978	-				+1.0
154,978	-				-2.0
155,238	+		GFF126	0.25	-3.3
155,239	-		GFF126	0.25	+1.3
155,258	+		GFF126	0.27	-3.5
155,258	+		GFF126	0.27	-1.8
155,259	-		GFF126	0.27	-4.2
155,367	-		GFF126	0.39	-5.6
155,864	+				-3.3
155,864	+				-3.9