Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF981 and GFF982 are separated by 4 nucleotides GFF982 and GFF983 overlap by 4 nucleotides GFF983 and GFF984 are separated by 40 nucleotides
GFF981 - Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4), at 299,282 to 300,712
GFF981
GFF982 - Cell division protein ZapE, at 300,717 to 301,817
GFF982
GFF983 - hypothetical protein, at 301,814 to 302,497
GFF983
GFF984 - Protein phosphatase 2C-like, at 302,538 to 303,230
GFF984
Position (kb)
300
301
302 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.739 kb on - strand at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.834 kb on + strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.835 kb on - strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.900 kb on + strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.901 kb on - strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.906 kb on + strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 300.907 kb on - strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.086 kb on + strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.087 kb on - strand, within GFF982 at 301.222 kb on - strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.347 kb on + strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.348 kb on - strand, within GFF982 at 301.440 kb on - strand, within GFF982 at 301.440 kb on - strand, within GFF982 at 301.536 kb on + strand, within GFF982 at 301.537 kb on - strand, within GFF982 at 301.647 kb on + strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.648 kb on - strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on + strand, within GFF982 at 301.701 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.702 kb on - strand, within GFF982 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.979 kb on + strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 301.980 kb on - strand, within GFF983 at 302.020 kb on + strand, within GFF983 at 302.326 kb on + strand, within GFF983 at 302.506 kb on + strand at 302.506 kb on + strand at 302.507 kb on - strand at 302.582 kb on - strand at 302.662 kb on + strand, within GFF984 at 302.662 kb on + strand, within GFF984 at 302.662 kb on + strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.663 kb on - strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.695 kb on + strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.696 kb on - strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.755 kb on + strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984 at 302.756 kb on - strand, within GFF984
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 300,738 + -2.1 300,738 + +1.6 300,738 + -0.1 300,738 + -1.4 300,738 + -2.6 300,738 + -2.4 300,738 + +0.0 300,738 + -3.6 300,738 + -1.6 300,738 + -1.2 300,739 - -4.3 300,739 - -1.8 300,739 - -1.8 300,739 - +1.6 300,834 + GFF982 0.11 -1.2 300,834 + GFF982 0.11 -0.4 300,834 + GFF982 0.11 -2.7 300,834 + GFF982 0.11 -1.7 300,835 - GFF982 0.11 -1.4 300,835 - GFF982 0.11 -1.7 300,835 - GFF982 0.11 -0.7 300,835 - GFF982 0.11 -2.5 300,835 - GFF982 0.11 -0.4 300,835 - GFF982 0.11 -0.7 300,835 - GFF982 0.11 -1.8 300,835 - GFF982 0.11 -2.8 300,900 + GFF982 0.17 -1.2 300,900 + GFF982 0.17 -0.6 300,900 + GFF982 0.17 +0.6 300,900 + GFF982 0.17 -3.8 300,901 - GFF982 0.17 -1.2 300,901 - GFF982 0.17 -2.2 300,901 - GFF982 0.17 -1.6 300,901 - GFF982 0.17 +0.6 300,901 - GFF982 0.17 -2.9 300,901 - GFF982 0.17 -3.2 300,901 - GFF982 0.17 -2.7 300,901 - GFF982 0.17 -1.2 300,906 + GFF982 0.17 -0.4 300,906 + GFF982 0.17 -1.4 300,906 + GFF982 0.17 -3.0 300,906 + GFF982 0.17 -1.7 300,906 + GFF982 0.17 +0.9 300,906 + GFF982 0.17 -2.1 300,906 + GFF982 0.17 -1.7 300,906 + GFF982 0.17 -0.4 300,906 + GFF982 0.17 -2.8 300,906 + GFF982 0.17 -2.7 300,906 + GFF982 0.17 -1.2 300,906 + GFF982 0.17 -2.6 300,906 + GFF982 0.17 -4.4 300,906 + GFF982 0.17 -1.0 300,906 + GFF982 0.17 -1.0 300,906 + GFF982 0.17 -1.0 300,906 + GFF982 0.17 -2.4 300,906 + GFF982 0.17 +0.9 300,906 + GFF982 0.17 -3.7 300,906 + GFF982 0.17 -1.0 300,907 - GFF982 0.17 -4.2 300,907 - GFF982 0.17 -2.7 300,907 - GFF982 0.17 -2.2 300,907 - GFF982 0.17 -2.2 300,907 - GFF982 0.17 -2.3 300,907 - GFF982 0.17 -3.0 300,907 - GFF982 0.17 -3.2 300,907 - GFF982 0.17 -3.5 300,907 - GFF982 0.17 -3.2 300,907 - GFF982 0.17 -3.4 300,907 - GFF982 0.17 -1.4 300,907 - GFF982 0.17 -3.0 300,907 - GFF982 0.17 -2.1 300,907 - GFF982 0.17 -0.7 300,907 - GFF982 0.17 -2.8 300,907 - GFF982 0.17 -1.7 300,907 - GFF982 0.17 -4.1 300,907 - GFF982 0.17 -2.6 300,907 - GFF982 0.17 -3.6 300,907 - GFF982 0.17 -3.2 300,907 - GFF982 0.17 -0.7 300,907 - GFF982 0.17 -3.6 300,907 - GFF982 0.17 -1.6 300,907 - GFF982 0.17 -1.2 300,907 - GFF982 0.17 -2.4 300,907 - GFF982 0.17 +0.0 300,907 - GFF982 0.17 -1.6 300,907 - GFF982 0.17 -2.8 300,907 - GFF982 0.17 -2.8 300,907 - GFF982 0.17 -0.6 300,907 - GFF982 0.17 -0.6 300,907 - GFF982 0.17 -1.3 300,907 - GFF982 0.17 -3.2 300,907 - GFF982 0.17 -1.0 300,907 - GFF982 0.17 -2.4 301,086 + GFF982 0.34 +0.0 301,086 + GFF982 0.34 +0.6 301,086 + GFF982 0.34 -3.6 301,087 - GFF982 0.34 -0.3 301,087 - GFF982 0.34 -0.4 301,087 - GFF982 0.34 -2.7 301,222 - GFF982 0.46 -1.8 301,347 + GFF982 0.57 -1.2 301,347 + GFF982 0.57 -1.2 301,347 + GFF982 0.57 -2.8 301,347 + GFF982 0.57 -3.2 301,347 + GFF982 0.57 -1.4 301,347 + GFF982 0.57 -3.5 301,347 + GFF982 0.57 -2.1 301,347 + GFF982 0.57 -3.5 301,347 + GFF982 0.57 -1.8 301,347 + GFF982 0.57 -1.4 301,347 + GFF982 0.57 -3.1 301,347 + GFF982 0.57 -3.1 301,347 + GFF982 0.57 -0.7 301,347 + GFF982 0.57 -3.9 301,347 + GFF982 0.57 -1.4 301,347 + GFF982 0.57 -1.4 301,347 + GFF982 0.57 -4.7 301,347 + GFF982 0.57 -3.7 301,347 + GFF982 0.57 -2.6 301,347 + GFF982 0.57 -1.8 301,348 - GFF982 0.57 +0.0 301,348 - GFF982 0.57 -1.4 301,348 - GFF982 0.57 -1.0 301,348 - GFF982 0.57 -1.8 301,348 - GFF982 0.57 -0.7 301,348 - GFF982 0.57 -1.7 301,348 - GFF982 0.57 -0.4 301,348 - GFF982 0.57 -2.5 301,348 - GFF982 0.57 -0.7 301,348 - GFF982 0.57 +0.0 301,348 - GFF982 0.57 -0.1 301,348 - GFF982 0.57 -1.6 301,348 - GFF982 0.57 -2.2 301,348 - GFF982 0.57 -1.7 301,348 - GFF982 0.57 -1.0 301,348 - GFF982 0.57 -1.2 301,348 - GFF982 0.57 -1.6 301,348 - GFF982 0.57 -2.8 301,348 - GFF982 0.57 -1.2 301,348 - GFF982 0.57 -2.3 301,348 - GFF982 0.57 -2.0 301,440 - GFF982 0.66 -1.6 301,440 - GFF982 0.66 -3.8 301,536 + GFF982 0.74 -3.6 301,537 - GFF982 0.74 -4.0 301,647 + GFF982 0.84 -1.4 301,648 - GFF982 0.85 -1.0 301,648 - GFF982 0.85 -0.4 301,648 - GFF982 0.85 -2.4 301,648 - GFF982 0.85 -0.4 301,701 + GFF982 0.89 -1.2 301,701 + GFF982 0.89 -1.7 301,701 + GFF982 0.89 -2.8 301,701 + GFF982 0.89 -1.4 301,701 + GFF982 0.89 -2.1 301,701 + GFF982 0.89 -0.6 301,701 - GFF982 0.89 -1.6 301,702 - GFF982 0.89 +0.6 301,702 - GFF982 0.89 +0.6 301,702 - GFF982 0.89 -1.5 301,702 - GFF982 0.89 -1.4 301,702 - GFF982 0.89 -2.2 301,702 - GFF982 0.89 -2.9 301,702 - GFF982 0.89 -2.6 301,979 + GFF983 0.24 +0.9 301,979 + GFF983 0.24 +0.0 301,979 + GFF983 0.24 -0.4 301,979 + GFF983 0.24 +0.0 301,979 + GFF983 0.24 +0.8 301,979 + GFF983 0.24 -1.0 301,979 + GFF983 0.24 +1.6 301,979 + GFF983 0.24 -1.6 301,980 - GFF983 0.24 -0.4 301,980 - GFF983 0.24 -0.9 301,980 - GFF983 0.24 +0.0 301,980 - GFF983 0.24 -2.9 301,980 - GFF983 0.24 +0.6 301,980 - GFF983 0.24 -0.6 301,980 - GFF983 0.24 -1.0 302,020 + GFF983 0.30 -0.4 302,326 + GFF983 0.75 +0.8 302,506 + -0.5 302,506 + +0.4 302,507 - +1.6 302,582 - +0.0 302,662 + GFF984 0.18 +0.1 302,662 + GFF984 0.18 +1.2 302,662 + GFF984 0.18 +0.4 302,663 - GFF984 0.18 +1.3 302,663 - GFF984 0.18 +0.0 302,663 - GFF984 0.18 -1.3 302,663 - GFF984 0.18 -0.4 302,663 - GFF984 0.18 -2.6 302,663 - GFF984 0.18 -1.4 302,695 + GFF984 0.23 +2.5 302,695 + GFF984 0.23 -2.2 302,695 + GFF984 0.23 -1.0 302,695 + GFF984 0.23 +3.4 302,695 + GFF984 0.23 +1.1 302,695 + GFF984 0.23 +0.3 302,695 + GFF984 0.23 -1.4 302,695 + GFF984 0.23 -0.2 302,696 - GFF984 0.23 -1.6 302,696 - GFF984 0.23 +0.1 302,696 - GFF984 0.23 +0.6 302,696 - GFF984 0.23 -3.2 302,755 + GFF984 0.31 -3.1 302,755 + GFF984 0.31 +0.8 302,755 + GFF984 0.31 +1.1 302,755 + GFF984 0.31 +0.1 302,755 + GFF984 0.31 -2.6 302,755 + GFF984 0.31 +0.6 302,755 + GFF984 0.31 -0.2 302,755 + GFF984 0.31 -0.4 302,755 + GFF984 0.31 +0.7 302,755 + GFF984 0.31 -2.6 302,755 + GFF984 0.31 +0.0 302,755 + GFF984 0.31 -1.7 302,755 + GFF984 0.31 -0.8 302,755 + GFF984 0.31 +0.4 302,755 + GFF984 0.31 -2.5 302,755 + GFF984 0.31 +1.7 302,755 + GFF984 0.31 -0.4 302,755 + GFF984 0.31 +1.2 302,755 + GFF984 0.31 +0.4 302,756 - GFF984 0.31 +0.3 302,756 - GFF984 0.31 -2.1 302,756 - GFF984 0.31 -3.1 302,756 - GFF984 0.31 +0.1 302,756 - GFF984 0.31 +1.5 302,756 - GFF984 0.31 -2.2 302,756 - GFF984 0.31 -1.4 302,756 - GFF984 0.31 +1.3 302,756 - GFF984 0.31 -0.9 302,756 - GFF984 0.31 -0.1 302,756 - GFF984 0.31 +4.2 302,756 - GFF984 0.31 -2.1 302,756 - GFF984 0.31 +1.0 302,756 - GFF984 0.31 -0.1
Or see this region's nucleotide sequence