Strain Fitness in Variovorax sp. SCN45 around GFF79

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
95,439	-		GFF78	0.35	+0.4
96,206	+				-0.0
96,206	+				-2.8
96,278	+				+1.7
96,278	+				+0.7
96,279	-				-1.9
96,279	-				-1.0
96,279	-				-3.7
96,458	-				-1.8
96,540	+				-0.2
96,570	+				+1.4
96,570	+				+1.4
96,571	-				-1.9
96,624	-				-0.5
96,672	+				-0.0
96,673	-				-0.8
96,701	+		GFF80	0.11	+1.5
96,702	-		GFF80	0.12	-1.3
96,846	+		GFF80	0.20	-1.8
96,847	-		GFF80	0.20	-0.5
96,847	-		GFF80	0.20	-1.0
96,847	-		GFF80	0.20	-0.8
96,909	+		GFF80	0.24	-1.2
96,910	-		GFF80	0.24	-2.7
96,910	-		GFF80	0.24	-3.7
97,039	-		GFF80	0.32	-2.5
97,203	+		GFF80	0.42	+0.1
97,203	+		GFF80	0.42	-2.4
97,203	+		GFF80	0.42	+1.6
97,203	+		GFF80	0.42	-1.8
97,203	+		GFF80	0.42	-0.6
97,204	-		GFF80	0.42	+0.4
97,204	-		GFF80	0.42	+1.2
97,206	+		GFF80	0.42	-2.7
97,207	-		GFF80	0.42	-3.5