Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7410 and GFF7411 overlap by 4 nucleotides GFF7411 and GFF7412 overlap by 4 nucleotides
GFF7410 - no description, at 338 to 574
GFF7410
GFF7411 - no description, at 571 to 1,416
GFF7411
GFF7412 - no description, at 1,413 to 1,997
GFF7412
Position (kb) 0
1 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 0.057 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.073 kb on + strand at 0.104 kb on - strand at 0.120 kb on + strand at 0.138 kb on + strand at 0.138 kb on + strand at 0.138 kb on + strand at 0.138 kb on + strand at 0.139 kb on - strand at 0.139 kb on - strand at 0.139 kb on - strand at 0.154 kb on + strand at 0.162 kb on + strand at 0.162 kb on + strand at 0.163 kb on - strand at 0.163 kb on - strand at 0.188 kb on + strand at 0.188 kb on + strand at 0.189 kb on - strand at 0.189 kb on - strand at 0.303 kb on + strand at 0.304 kb on - strand at 0.304 kb on - strand at 0.326 kb on + strand at 0.326 kb on + strand at 0.326 kb on + strand at 0.326 kb on + strand at 0.326 kb on + strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.327 kb on - strand at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.368 kb on + strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.369 kb on - strand, within GFF7410 at 0.446 kb on + strand, within GFF7410 at 0.446 kb on + strand, within GFF7410 at 0.581 kb on + strand at 0.581 kb on + strand at 0.581 kb on + strand at 0.582 kb on - strand at 0.582 kb on - strand at 0.582 kb on - strand at 0.601 kb on + strand at 0.601 kb on + strand at 0.601 kb on + strand at 0.602 kb on - strand at 0.602 kb on - strand at 0.655 kb on + strand at 0.655 kb on + strand at 0.655 kb on + strand at 0.655 kb on + strand at 0.655 kb on + strand at 0.656 kb on - strand, within GFF7411 at 0.656 kb on - strand, within GFF7411 at 0.656 kb on - strand, within GFF7411 at 0.675 kb on + strand, within GFF7411 at 0.675 kb on + strand, within GFF7411 at 0.675 kb on + strand, within GFF7411 at 0.675 kb on + strand, within GFF7411 at 0.676 kb on - strand, within GFF7411 at 0.886 kb on + strand, within GFF7411 at 0.927 kb on + strand, within GFF7411 at 0.927 kb on + strand, within GFF7411 at 0.927 kb on + strand, within GFF7411 at 0.927 kb on + strand, within GFF7411 at 0.927 kb on + strand, within GFF7411 at 0.928 kb on - strand, within GFF7411 at 0.982 kb on + strand, within GFF7411 at 0.982 kb on + strand, within GFF7411 at 1.097 kb on + strand, within GFF7411 at 1.108 kb on + strand, within GFF7411 at 1.109 kb on - strand, within GFF7411 at 1.109 kb on - strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.174 kb on + strand, within GFF7411 at 1.175 kb on - strand, within GFF7411 at 1.175 kb on - strand, within GFF7411 at 1.175 kb on - strand, within GFF7411 at 1.175 kb on - strand, within GFF7411 at 1.175 kb on - strand, within GFF7411 at 1.184 kb on - strand, within GFF7411 at 1.184 kb on - strand, within GFF7411 at 1.473 kb on + strand, within GFF7412 at 1.474 kb on - strand, within GFF7412 at 1.474 kb on - strand, within GFF7412 at 1.474 kb on - strand, within GFF7412 at 1.474 kb on - strand, within GFF7412 at 1.474 kb on - strand, within GFF7412 at 1.482 kb on + strand, within GFF7412 at 1.482 kb on + strand, within GFF7412
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 57 + -4.1 73 + +0.3 73 + -1.8 73 + +0.4 73 + -1.6 73 + -1.3 73 + +0.2 73 + -1.2 73 + +0.7 73 + -3.1 104 - -1.9 120 + +1.3 138 + -0.4 138 + -2.4 138 + +0.4 138 + -0.5 139 - +0.0 139 - +1.3 139 - -0.0 154 + +0.6 162 + -2.6 162 + -3.5 163 - -2.4 163 - -0.4 188 + -2.7 188 + -0.2 189 - +0.3 189 - -2.3 303 + -0.7 304 - -1.6 304 - +0.4 326 + -1.0 326 + -0.1 326 + -1.7 326 + +1.1 326 + +0.5 327 - -0.8 327 - -1.0 327 - +0.9 327 - -0.4 327 - +1.0 327 - -1.6 327 - -1.8 327 - +0.1 327 - -3.0 327 - -0.1 368 + GFF7410 0.13 +1.0 368 + GFF7410 0.13 -2.1 368 + GFF7410 0.13 +0.2 368 + GFF7410 0.13 +2.1 368 + GFF7410 0.13 -2.3 368 + GFF7410 0.13 +1.5 368 + GFF7410 0.13 +0.8 368 + GFF7410 0.13 -2.9 368 + GFF7410 0.13 -1.6 368 + GFF7410 0.13 +1.0 369 - GFF7410 0.13 +0.9 369 - GFF7410 0.13 +0.1 369 - GFF7410 0.13 +0.8 369 - GFF7410 0.13 -0.0 369 - GFF7410 0.13 +3.2 369 - GFF7410 0.13 -1.9 369 - GFF7410 0.13 -0.8 369 - GFF7410 0.13 -0.5 369 - GFF7410 0.13 -0.9 369 - GFF7410 0.13 -2.2 369 - GFF7410 0.13 +0.6 446 + GFF7410 0.46 +2.7 446 + GFF7410 0.46 -0.2 581 + -0.7 581 + -1.6 581 + +0.4 582 - +0.2 582 - -2.3 582 - +1.8 601 + -0.3 601 + -2.2 601 + +1.6 602 - -0.3 602 - +0.7 655 + -1.7 655 + -4.0 655 + -1.3 655 + +1.5 655 + -1.0 656 - GFF7411 0.10 +0.3 656 - GFF7411 0.10 -1.6 656 - GFF7411 0.10 -0.1 675 + GFF7411 0.12 -0.7 675 + GFF7411 0.12 +0.0 675 + GFF7411 0.12 +0.9 675 + GFF7411 0.12 -3.6 676 - GFF7411 0.12 -1.9 886 + GFF7411 0.37 +0.1 927 + GFF7411 0.42 -0.2 927 + GFF7411 0.42 -0.3 927 + GFF7411 0.42 -0.7 927 + GFF7411 0.42 -3.4 927 + GFF7411 0.42 -1.0 928 - GFF7411 0.42 +1.3 982 + GFF7411 0.49 -1.2 982 + GFF7411 0.49 +0.0 1,097 + GFF7411 0.62 -1.0 1,108 + GFF7411 0.63 -0.4 1,109 - GFF7411 0.64 -1.9 1,109 - GFF7411 0.64 -1.6 1,174 + GFF7411 0.71 -2.9 1,174 + GFF7411 0.71 -1.0 1,174 + GFF7411 0.71 -3.8 1,174 + GFF7411 0.71 -0.1 1,174 + GFF7411 0.71 +2.8 1,174 + GFF7411 0.71 +0.6 1,174 + GFF7411 0.71 -0.3 1,174 + GFF7411 0.71 -1.9 1,174 + GFF7411 0.71 -2.1 1,174 + GFF7411 0.71 +0.1 1,175 - GFF7411 0.71 +0.0 1,175 - GFF7411 0.71 -0.5 1,175 - GFF7411 0.71 -0.5 1,175 - GFF7411 0.71 -1.6 1,175 - GFF7411 0.71 +0.6 1,184 - GFF7411 0.72 -3.3 1,184 - GFF7411 0.72 +0.6 1,473 + GFF7412 0.10 -2.2 1,474 - GFF7412 0.10 +1.1 1,474 - GFF7412 0.10 -1.2 1,474 - GFF7412 0.10 -2.6 1,474 - GFF7412 0.10 +1.7 1,474 - GFF7412 0.10 +0.8 1,482 + GFF7412 0.12 -4.1 1,482 + GFF7412 0.12 +1.5
Or see this region's nucleotide sequence