Strain Fitness in Variovorax sp. SCN45 around GFF7314

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
7,038	+				-2.4
7,038	+				+0.4
7,038	+				+1.1
7,039	-				-0.3
7,039	-				-1.0
7,039	-				-0.4
7,117	+				-3.8
7,117	+				+0.6
7,117	+				-0.3
7,137	+				-2.0
7,137	+				-0.4
7,137	+				-2.6
7,137	+				+0.4
7,137	+				-0.1
7,137	+				+0.7
7,138	-				-2.4
7,138	-				-0.0
7,138	-				-0.8
7,138	-				-1.4
7,138	-				-1.0
7,138	-				+0.6
7,138	-				+0.2
7,138	-				-1.5
7,138	-				-2.4
7,138	-				+2.9
7,138	-				-0.6
7,138	-				-0.9
7,138	-				+1.5
7,138	-				+0.4
7,257	+		GFF7313	0.21	+2.1
7,257	+		GFF7313	0.21	-3.5
7,257	+		GFF7313	0.21	+4.1
7,257	+		GFF7313	0.21	-1.0
7,257	+		GFF7313	0.21	+1.7
7,257	+		GFF7313	0.21	+0.0
7,257	+		GFF7313	0.21	-1.4
7,257	+		GFF7313	0.21	-0.6
7,257	+		GFF7313	0.21	-2.7
7,257	+		GFF7313	0.21	-1.6
7,257	+		GFF7313	0.21	-1.7
7,257	+		GFF7313	0.21	+0.7
7,258	-		GFF7313	0.21	+1.4
7,258	-		GFF7313	0.21	+2.1
7,258	-		GFF7313	0.21	+1.3
7,258	-		GFF7313	0.21	-0.2
7,258	-		GFF7313	0.21	-0.0
7,258	-		GFF7313	0.21	-1.5
7,258	-		GFF7313	0.21	-2.7
7,258	-		GFF7313	0.21	-1.6
7,258	-		GFF7313	0.21	-2.2
7,258	-		GFF7313	0.21	+0.5
7,258	-		GFF7313	0.21	-0.4
7,258	-		GFF7313	0.21	-2.6
7,258	-		GFF7313	0.21	+0.4
7,258	-		GFF7313	0.21	-1.7
7,258	-		GFF7313	0.21	+0.0
7,258	-		GFF7313	0.21	+0.9
7,258	-		GFF7313	0.21	-1.3
7,258	-		GFF7313	0.21	-1.4
7,263	+		GFF7313	0.22	-3.8
7,263	+		GFF7313	0.22	-0.4
7,263	+		GFF7313	0.22	-2.9
7,263	+		GFF7313	0.22	+0.2
7,263	+		GFF7313	0.22	-1.0
7,263	+		GFF7313	0.22	+1.5
7,264	-		GFF7313	0.22	-2.5
7,264	-		GFF7313	0.22	+0.6
7,264	-		GFF7313	0.22	-0.4
7,264	-		GFF7313	0.22	-0.8
7,264	-		GFF7313	0.22	-0.6
7,264	-		GFF7313	0.22	+0.2
7,264	-		GFF7313	0.22	+0.4
7,264	-		GFF7313	0.22	-1.6
7,264	-		GFF7313	0.22	+1.1
7,333	+		GFF7313	0.32	+1.1
7,333	+		GFF7313	0.32	+1.0
7,333	+		GFF7313	0.32	+0.2
7,334	-		GFF7313	0.32	-0.3
7,334	-		GFF7313	0.32	+2.8
7,431	+		GFF7313	0.46	+0.8
7,432	-		GFF7313	0.46	-0.0
7,432	-		GFF7313	0.46	+0.4
7,432	-		GFF7313	0.46	+0.3
7,432	-		GFF7313	0.46	+0.4
7,432	-		GFF7313	0.46	-0.4
7,445	+		GFF7313	0.48	+1.4
7,445	+		GFF7313	0.48	+0.0
7,589	+		GFF7313	0.68	+1.4
7,657	+		GFF7313	0.77	+2.2
7,657	+		GFF7313	0.77	-0.6
7,658	-		GFF7313	0.77	-0.1
7,658	-		GFF7313	0.77	-0.5
7,789	+				+0.6
7,790	-				+0.2
7,790	-				+0.5
7,803	+				-0.0
7,804	-				+1.9
7,811	+				+1.6
7,812	-				-3.9
7,815	+				-0.7
7,825	+				+0.2
7,825	+				+2.0
7,825	+				+0.6
7,825	+				+0.6
7,863	+				+0.3
7,880	+				+1.6
7,881	-				-2.2
7,895	+				-0.6
7,896	-				-2.9
7,896	-				-0.0
7,896	-				-2.3
7,901	+				+0.3
7,923	+				-0.3
7,924	-				+0.1
7,924	-				-1.4
8,015	-		GFF7314	0.17	-0.0
8,030	+		GFF7314	0.19	-0.0
8,030	+		GFF7314	0.19	-0.6
8,062	+		GFF7314	0.23	+0.5
8,062	+		GFF7314	0.23	+0.7
8,063	-		GFF7314	0.23	-0.1
8,063	-		GFF7314	0.23	-2.4
8,065	+		GFF7314	0.23	+1.6
8,066	-		GFF7314	0.23	+0.8
8,123	+		GFF7314	0.31	+1.0
8,152	+		GFF7314	0.35	+0.3
8,153	-		GFF7314	0.35	+1.5
8,153	-		GFF7314	0.35	+0.2
8,153	-		GFF7314	0.35	-1.4
8,183	+		GFF7314	0.39	+0.4
8,183	+		GFF7314	0.39	+0.2
8,183	+		GFF7314	0.39	-0.1
8,184	-		GFF7314	0.39	-0.5
8,184	-		GFF7314	0.39	+1.1
8,184	-		GFF7314	0.39	-2.1
8,184	-		GFF7314	0.39	-0.5
8,184	-		GFF7314	0.39	-2.5
8,184	-		GFF7314	0.39	-1.6
8,280	+		GFF7314	0.52	+0.6
8,281	-		GFF7314	0.52	-1.9
8,281	-		GFF7314	0.52	+0.2
8,281	-		GFF7314	0.52	-2.7
8,281	-		GFF7314	0.52	+0.9
8,309	+		GFF7314	0.56	-2.0
8,309	+		GFF7314	0.56	-1.8
8,310	-		GFF7314	0.56	+2.5
8,310	-		GFF7314	0.56	+0.6
8,310	-		GFF7314	0.56	+2.3
8,310	-		GFF7314	0.56	-0.1
8,310	-		GFF7314	0.56	-1.8
8,310	-		GFF7314	0.56	+1.1
8,413	+		GFF7314	0.70	-1.0
8,413	+		GFF7314	0.70	-2.0
8,413	+		GFF7314	0.70	-1.0
8,413	+		GFF7314	0.70	+1.8
8,413	+		GFF7314	0.70	-3.2
8,413	+		GFF7314	0.70	-1.0
8,413	+		GFF7314	0.70	+0.1
8,413	+		GFF7314	0.70	-0.8
8,413	+		GFF7314	0.70	+0.0
8,414	-		GFF7314	0.70	-3.9
8,414	-		GFF7314	0.70	+0.5
8,414	-		GFF7314	0.70	-2.6
8,427	+		GFF7314	0.72	+0.4
8,427	+		GFF7314	0.72	-1.2
8,427	+		GFF7314	0.72	-0.4
8,427	+		GFF7314	0.72	+0.5
8,427	+		GFF7314	0.72	+1.0
8,427	+		GFF7314	0.72	-2.1
8,428	-		GFF7314	0.72	-1.5
8,428	-		GFF7314	0.72	-1.7
8,428	-		GFF7314	0.72	-0.3
8,428	-		GFF7314	0.72	-3.4
8,428	-		GFF7314	0.72	+1.1
8,428	-		GFF7314	0.72	+2.0
8,428	-		GFF7314	0.72	-2.1
8,452	+		GFF7314	0.75	-0.0
8,452	+		GFF7314	0.75	-1.0
8,452	+		GFF7314	0.75	-0.2
8,452	+		GFF7314	0.75	-2.5
8,452	+		GFF7314	0.75	-2.4
8,452	+		GFF7314	0.75	+0.1
8,452	+		GFF7314	0.75	-0.3
8,452	+		GFF7314	0.75	+2.4
8,452	+		GFF7314	0.75	-0.6
8,452	+		GFF7314	0.75	-1.0
8,452	+		GFF7314	0.75	-0.1
8,452	+		GFF7314	0.75	-1.5
8,452	+		GFF7314	0.75	+3.1
8,452	+		GFF7314	0.75	-0.3
8,452	+		GFF7314	0.75	-1.4
8,452	+		GFF7314	0.75	-1.7
8,452	+		GFF7314	0.75	+0.8
8,452	+		GFF7314	0.75	-0.8
8,452	+		GFF7314	0.75	-1.4
8,452	+		GFF7314	0.75	+0.4
8,452	+		GFF7314	0.75	+0.4
8,452	+		GFF7314	0.75	+1.3
8,452	+		GFF7314	0.75	-2.4
8,453	-		GFF7314	0.75	+0.4
8,453	-		GFF7314	0.75	+0.2
8,453	-		GFF7314	0.75	-0.0
8,453	-		GFF7314	0.75	-4.0
8,453	-		GFF7314	0.75	-1.6
8,453	-		GFF7314	0.75	-3.1
8,453	-		GFF7314	0.75	+0.3
8,453	-		GFF7314	0.75	-1.5
8,453	-		GFF7314	0.75	-0.1
8,453	-		GFF7314	0.75	-0.4
8,453	-		GFF7314	0.75	-2.1
8,453	-		GFF7314	0.75	-0.4
8,453	-		GFF7314	0.75	-1.9
8,453	-		GFF7314	0.75	+1.3
8,453	-		GFF7314	0.75	-1.6
8,453	-		GFF7314	0.75	-3.7
8,453	-		GFF7314	0.75	-2.7
8,453	-		GFF7314	0.75	-3.2
8,453	-		GFF7314	0.75	+2.6
8,453	-		GFF7314	0.75	+1.5
8,453	-		GFF7314	0.75	-2.1
8,453	-		GFF7314	0.75	-0.8
8,467	-		GFF7314	0.77	+0.2
8,494	+		GFF7314	0.81	-1.2
8,494	+		GFF7314	0.81	-0.8
8,494	+		GFF7314	0.81	+0.6
8,494	+		GFF7314	0.81	+0.6
8,494	+		GFF7314	0.81	-1.8
8,494	+		GFF7314	0.81	-2.2
8,494	+		GFF7314	0.81	-1.8
8,494	+		GFF7314	0.81	+1.2
8,494	+		GFF7314	0.81	-1.0
8,495	-		GFF7314	0.81	-2.8
8,495	-		GFF7314	0.81	-2.2
8,495	-		GFF7314	0.81	-1.2
8,495	-		GFF7314	0.81	+0.4
8,495	-		GFF7314	0.81	-1.2
8,495	-		GFF7314	0.81	+1.0
8,495	-		GFF7314	0.81	-1.5
8,495	-		GFF7314	0.81	-0.5
8,495	-		GFF7314	0.81	+0.4
8,495	-		GFF7314	0.81	+0.4
8,495	-		GFF7314	0.81	+0.2
8,495	-		GFF7314	0.81	-0.8
8,558	+		GFF7314	0.89	-0.1
8,558	+		GFF7314	0.89	+0.7
8,559	-		GFF7314	0.89	+0.9
8,726	-		GFF7315	0.11	+1.2
8,735	+		GFF7315	0.13	+0.3
8,735	+		GFF7315	0.13	-1.9
8,736	-		GFF7315	0.13	-2.2
8,856	-		GFF7315	0.30	+1.0
8,857	+		GFF7315	0.30	-3.2
8,857	+		GFF7315	0.30	+0.3
8,858	-		GFF7315	0.30	-0.3
8,858	-		GFF7315	0.30	+2.6
8,858	-		GFF7315	0.30	+3.7
8,928	+		GFF7315	0.40	-2.3
8,928	+		GFF7315	0.40	-1.6
8,929	-		GFF7315	0.40	-0.0
8,929	-		GFF7315	0.40	+1.2
8,929	-		GFF7315	0.40	-0.4
9,005	+		GFF7315	0.51	-2.3
9,006	-		GFF7315	0.51	-1.5
9,135	+		GFF7315	0.69	-0.4
9,135	+		GFF7315	0.69	-1.9
9,136	-		GFF7315	0.69	-1.5
9,136	-		GFF7315	0.69	-1.7
9,335	+				+0.6
9,335	+				-1.5
9,335	+				-2.0
9,335	+				-3.4
9,335	+				-0.6
9,335	+				+1.6
9,335	+				+1.6
9,335	+				+0.4
9,335	+				-2.2
9,335	+				-0.4
9,336	-				+0.1
9,336	-				-1.8
9,336	-				-2.2
9,485	+		GFF7316	0.49	-1.4
9,485	+		GFF7316	0.49	-2.4
9,485	+		GFF7316	0.49	-1.5
9,485	+		GFF7316	0.49	+0.4
9,485	+		GFF7316	0.49	+2.9
9,485	+		GFF7316	0.49	-0.2
9,485	+		GFF7316	0.49	+2.0
9,485	+		GFF7316	0.49	+0.1
9,485	+		GFF7316	0.49	-1.6
9,485	+		GFF7316	0.49	-1.6
9,485	+		GFF7316	0.49	+1.1
9,485	+		GFF7316	0.49	+2.8
9,485	+		GFF7316	0.49	-1.4
9,485	+		GFF7316	0.49	-0.3
9,485	+		GFF7316	0.49	+0.7
9,485	+		GFF7316	0.49	+0.8
9,485	+		GFF7316	0.49	-1.8
9,486	-		GFF7316	0.49	-1.8
9,486	-		GFF7316	0.49	-0.6
9,486	-		GFF7316	0.49	-0.2
9,486	-		GFF7316	0.49	+2.0
9,486	-		GFF7316	0.49	+1.5
9,486	-		GFF7316	0.49	-0.6
9,486	-		GFF7316	0.49	+1.2
9,633	+				-4.4
9,633	+				+0.3
9,633	+				-0.8
9,633	+				+2.6
9,633	+				+0.5
9,633	+				-0.1
9,633	+				-1.4
9,633	+				-0.4
9,634	-				-1.0
9,634	-				-1.4
9,634	-				+1.0
9,634	-				-0.0