Strain Fitness in Variovorax sp. SCN45 around GFF69

Experiment: Community=arabino-guar; Passage=4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Community=arabino-guar; Passage=4
85,265	-		GFF68	0.26	-0.5
85,267	+		GFF68	0.27	+0.4
85,360	+		GFF68	0.35	-0.5
85,360	+		GFF68	0.35	-0.5
85,361	-		GFF68	0.35	-1.5
85,420	+		GFF68	0.40	-2.0
85,420	+		GFF68	0.40	+0.1
85,505	-		GFF68	0.48	+0.6
85,582	+		GFF68	0.55	+1.2
85,582	+		GFF68	0.55	-3.5
85,583	-		GFF68	0.55	-1.0
85,583	-		GFF68	0.55	+0.2
85,616	-		GFF68	0.58	+1.1
85,639	+		GFF68	0.60	+2.2
85,672	+		GFF68	0.63	+0.5
85,672	+		GFF68	0.63	-2.0
85,673	-		GFF68	0.63	+0.1
85,673	-		GFF68	0.63	+0.5
86,286	+		GFF69	0.26	-1.5
86,286	+		GFF69	0.26	-0.6
86,286	+		GFF69	0.26	+0.0
86,286	+		GFF69	0.26	-1.4
86,508	-		GFF69	0.55	-0.5
86,795	+				-3.5
86,795	+				+2.2
86,795	+				+0.5
86,795	+				+0.1
86,795	+				+0.5
86,796	-				-1.1
86,796	-				+2.5
86,796	-				-3.8
86,796	-				-2.2
86,838	-				-0.6
86,838	-				-0.9
86,846	+				-3.5
86,846	+				-2.0
87,236	+		GFF70	0.23	+0.4
87,236	+		GFF70	0.23	-2.3
87,237	-		GFF70	0.23	-3.5
87,237	-		GFF70	0.23	+1.3
87,351	+		GFF70	0.30	+0.1
87,351	+		GFF70	0.30	+1.9
87,351	+		GFF70	0.30	-1.3
87,351	+		GFF70	0.30	+0.7
87,351	+		GFF70	0.30	-2.5
87,352	-		GFF70	0.30	-1.5
87,352	-		GFF70	0.30	-0.7
87,352	-		GFF70	0.30	+1.8
87,352	-		GFF70	0.30	-1.6
87,355	+		GFF70	0.31	-0.5
87,355	+		GFF70	0.31	-0.8
87,356	-		GFF70	0.31	-1.0
87,356	-		GFF70	0.31	-2.8
87,356	-		GFF70	0.31	-1.0
87,459	+		GFF70	0.38	-1.8