Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6736 and GFF6737 are separated by 212 nucleotides GFF6737 and GFF6738 overlap by 4 nucleotides
GFF6736 - Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter, at 47,669 to 49,354
GFF6736
GFF6737 - Uncharacterized aldehyde oxidase, 2Fe-2S subunit, at 49,567 to 50,070
GFF6737
GFF6738 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 50,067 to 52,316
GFF6738
Position (kb) 49
50
51 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 49.179 kb on + strand, within GFF6736 at 49.179 kb on + strand, within GFF6736 at 49.179 kb on + strand, within GFF6736 at 49.245 kb on + strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.520 kb on - strand at 49.575 kb on + strand at 49.576 kb on - strand at 49.576 kb on - strand at 49.576 kb on - strand at 49.582 kb on - strand at 49.902 kb on - strand, within GFF6737 at 49.902 kb on - strand, within GFF6737 at 49.935 kb on - strand, within GFF6737 at 49.971 kb on + strand, within GFF6737 at 49.971 kb on + strand, within GFF6737 at 49.972 kb on - strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.976 kb on - strand, within GFF6737 at 50.310 kb on + strand, within GFF6738 at 50.310 kb on + strand, within GFF6738 at 50.310 kb on + strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.461 kb on - strand, within GFF6738
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 49,179 + GFF6736 0.90 -2.0 49,179 + GFF6736 0.90 +1.9 49,179 + GFF6736 0.90 +1.3 49,245 + -1.4 49,246 - +3.0 49,246 - +0.4 49,246 - +1.0 49,246 - -2.8 49,246 - -0.8 49,520 - +0.2 49,575 + +0.6 49,576 - +0.4 49,576 - -0.4 49,576 - -1.8 49,582 - -1.7 49,902 - GFF6737 0.66 -1.7 49,902 - GFF6737 0.66 +2.0 49,935 - GFF6737 0.73 +1.3 49,971 + GFF6737 0.80 -2.9 49,971 + GFF6737 0.80 -0.8 49,972 - GFF6737 0.80 -0.3 49,975 + GFF6737 0.81 -1.6 49,975 + GFF6737 0.81 +1.0 49,975 + GFF6737 0.81 -1.5 49,976 - GFF6737 0.81 +0.4 50,310 + GFF6738 0.11 +0.8 50,310 + GFF6738 0.11 +1.8 50,310 + GFF6738 0.11 -0.6 50,311 - GFF6738 0.11 -0.4 50,311 - GFF6738 0.11 +3.4 50,311 - GFF6738 0.11 -0.4 50,311 - GFF6738 0.11 -3.9 50,460 + GFF6738 0.17 -2.2 50,460 + GFF6738 0.17 -1.0 50,460 + GFF6738 0.17 -4.2 50,460 + GFF6738 0.17 +0.6 50,461 - GFF6738 0.18 +0.2
Or see this region's nucleotide sequence