Experiment: Community=arabino-guar; Passage=4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6725 and GFF6726 overlap by 4 nucleotides GFF6726 and GFF6727 overlap by 1 nucleotides GFF6727 and GFF6728 are separated by 18 nucleotides
GFF6725 - Tellurite resistance protein, at 35,058 to 36,308
GFF6725
GFF6726 - hypothetical protein, at 36,305 to 37,909
GFF6726
GFF6727 - no description, at 37,909 to 38,538
GFF6727
GFF6728 - Probable VANILLIN dehydrogenase oxidoreductase protein (EC 1.-.-.-), at 38,557 to 40,008
GFF6728
Position (kb) 36
37
38 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 35.685 kb on + strand, within GFF6725 at 35.685 kb on + strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.686 kb on - strand, within GFF6725 at 35.793 kb on + strand, within GFF6725 at 36.133 kb on + strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.136 kb on - strand, within GFF6725 at 36.237 kb on + strand at 36.238 kb on - strand at 36.238 kb on - strand at 36.768 kb on - strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.986 kb on + strand, within GFF6726 at 36.987 kb on - strand, within GFF6726 at 37.118 kb on + strand, within GFF6726 at 37.119 kb on - strand, within GFF6726 at 37.284 kb on + strand, within GFF6726 at 37.295 kb on + strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.296 kb on - strand, within GFF6726 at 37.452 kb on - strand, within GFF6726 at 37.524 kb on + strand, within GFF6726 at 37.613 kb on + strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 37.614 kb on - strand, within GFF6726 at 38.056 kb on + strand, within GFF6727 at 38.057 kb on - strand, within GFF6727 at 38.057 kb on - strand, within GFF6727 at 38.305 kb on + strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.330 kb on - strand, within GFF6727 at 38.883 kb on - strand, within GFF6728
Per-strain Table
Position Strand Gene LocusTag Fraction Community=arabino-guar; Passage=4 remove 35,685 + GFF6725 0.50 +0.3 35,685 + GFF6725 0.50 +2.0 35,686 - GFF6725 0.50 +2.5 35,686 - GFF6725 0.50 +1.2 35,793 + GFF6725 0.59 -1.8 36,133 + GFF6725 0.86 +0.3 36,136 - GFF6725 0.86 -0.9 36,136 - GFF6725 0.86 +0.6 36,237 + -3.4 36,238 - +0.4 36,238 - -0.8 36,768 - GFF6726 0.29 -2.2 36,986 + GFF6726 0.42 +0.1 36,986 + GFF6726 0.42 -0.5 36,987 - GFF6726 0.42 -0.2 37,118 + GFF6726 0.51 -0.1 37,119 - GFF6726 0.51 +1.0 37,284 + GFF6726 0.61 -3.6 37,295 + GFF6726 0.62 -2.1 37,296 - GFF6726 0.62 -3.0 37,296 - GFF6726 0.62 -2.4 37,296 - GFF6726 0.62 -0.4 37,452 - GFF6726 0.71 -1.4 37,524 + GFF6726 0.76 +1.1 37,613 + GFF6726 0.81 -0.0 37,614 - GFF6726 0.82 -1.1 37,614 - GFF6726 0.82 -2.1 37,614 - GFF6726 0.82 -0.7 38,056 + GFF6727 0.23 +0.5 38,057 - GFF6727 0.23 +2.2 38,057 - GFF6727 0.23 -1.4 38,305 + GFF6727 0.63 +0.9 38,330 - GFF6727 0.67 -1.3 38,330 - GFF6727 0.67 +0.3 38,330 - GFF6727 0.67 +0.7 38,883 - GFF6728 0.22 -1.5
Or see this region's nucleotide sequence